RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 CDH19Q9H159 772 aa7.97□□□□□ -1.13
EXOSC3-206ENST00000489414 MCCC2Q9HCC0 563 aa7.97□□□□□ -1.13
EXOSC3-206ENST00000489414 SPHK2Q9NRA0 654 aa7.97□□□□□ -1.13
EXOSC3-206ENST00000489414 HELLSQ9NRZ9 838 aa7.97□□□□□ -1.13
EXOSC3-206ENST00000489414 CFAP97Q9P2B7 532 aa7.97□□□□□ -1.13
EXOSC3-206ENST00000489414 LOXL2Q9Y4K0 774 aa7.97□□□□□ -1.13
EXOSC3-206ENST00000489414 CPQQ9Y646 472 aa7.97□□□□□ -1.13
EXOSC3-206ENST00000489414 ZGRF1Q86YA3 2104 aa7.96□□□□□ -1.13
EXOSC3-206ENST00000489414 TMX2-CTNND1H3BSU7 103 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 K7ESM1 405 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 SH2B2O14492 632 aaPredicted RBP7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 ADAMTS3O15072 1205 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 OLFM2O95897 454 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 HEXAP06865 529 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 CALM1P0DP23 149 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 CALM2P0DP24 149 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 CALM3P0DP25 149 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 VAV1P15498 845 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 PTMSP20962 102 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 ACO1P21399 889 aaKnown RBP7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 GLRA2P23416 452 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 PRKCHP24723 683 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 NOP2P46087 812 aaKnown RBP7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 SMARCB1Q12824 385 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 LRCH2Q5VUJ6 765 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 PARS2Q7L3T8 475 aaKnown RBP7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 HEATR3Q7Z4Q2 680 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 ZNF589Q86UQ0 364 aaPredicted RBP7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 NXPE1Q8N323 547 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 SRBD1Q8N5C6 995 aaKnown RBP7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 IL22RA1Q8N6P7 574 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 SLC5A5Q92911 643 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 NINJ1Q92982 152 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 SERAC1Q96JX3 654 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 TEKT3Q9BXF9 490 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 KRT23Q9C075 422 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 RTN4Q9NQC3 1192 aaKnown RBP7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 SMPD4Q9NXE4 827 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 ABI2Q9NYB9 513 aaPredicted RBP7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 MAP10Q9P2G4 905 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 LRWD1Q9UFC0 647 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 CROTQ9UKG9 612 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 KCTD3Q9Y597 815 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 BIRC6Q9NR09 4857 aa7.96□□□□□ -1.14
EXOSC3-206ENST00000489414 hCG_1642624A0A1W2PR95 340 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 KCNN4O15554 427 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 PSMD10O75832 226 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 PIAS2O75928 621 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 PLEKHA8P1O95397 391 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 CISD3P0C7P0 127 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 CCKBRP32239 447 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 CIITAP33076 1130 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 ARL2P36404 184 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 SAFBQ15424 915 aaKnown RBP eCLIP7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 ZNF630Q2M218 657 aaPredicted RBP7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 CDCA2Q69YH5 1023 aaPredicted RBP7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 ZCCHC8Q6NZY4 707 aaKnown RBP7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 NCEH1Q6PIU2 408 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 CLEC9AQ6UXN8 241 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 CYB5R4Q7L1T6 521 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 LRRTM3Q86VH5 581 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 IQCHQ86VS3 1027 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 GJA10Q969M2 543 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 C19orf60Q96EN9 201 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 GBP4Q96PP9 640 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 FOXP3Q9BZS1 431 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 RNF38Q9H0F5 515 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 TOPORSQ9NS56 1045 aaPredicted RBP7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 NCKIPSDQ9NZQ3 722 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 WRAP73Q9P2S5 460 aaPredicted RBP7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 TLK1Q9UKI8 766 aa7.95□□□□□ -1.14
EXOSC3-206ENST00000489414 A0A0D9SFI3 127 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 FAM47DPA6NHR8 397 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 SCAMP1O15126 338 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 SGSM2O43147 1006 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 MAGEC1O60732 1142 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 F9P00740 461 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 EDN1P05305 212 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 ARSDP51689 593 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 GALCP54803 685 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 CDH8P55286 799 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 ZBTB16Q05516 673 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 OVGP1Q12889 678 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 PRPF4BQ13523 1007 aaKnown RBP7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 CAMK2GQ13555 558 aaPredicted RBP7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 ELOAQ14241 798 aaKnown RBP7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 DRAP1Q14919 205 aaPredicted RBP7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 CRTC2Q53ET0 693 aaPredicted RBP7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 WWC2Q6AWC2 1192 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 BNC2Q6ZN30 1099 aaPredicted RBP7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 DDX42Q86XP3 938 aaKnown RBP eCLIP7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 TMEM130Q8N3G9 435 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 FUBP3Q96I24 572 aaKnown RBP eCLIP7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 XPO6Q96QU8 1125 aaKnown RBP7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 MAP3K14Q99558 947 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 DUSP9Q99956 384 aaKnown RBP7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 CAAP1Q9H8G2 361 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 CNTN3Q9P232 1028 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 USP20Q9Y2K6 914 aa7.94□□□□□ -1.14
EXOSC3-206ENST00000489414 SNX14Q9Y5W7 946 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms