RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SEMA3BQ13214 749 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 KCNJ12Q14500 433 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 ZNF268Q14587 947 aaPredicted RBP5.01□□□□□ -1.61
ITGB1-214ENST00000488427 MPEG1Q2M385 716 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 MIS18BP1Q6P0N0 1132 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 ZNF813Q6ZN06 617 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 TOGARAM2Q6ZUX3 1019 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 KRT27Q7Z3Y8 459 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 CHSY1Q86X52 802 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 NRSN1Q8IZ57 195 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 CLASRPQ8N2M8 674 aaKnown RBP5.01□□□□□ -1.61
ITGB1-214ENST00000488427 CUL5Q93034 780 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 TMEM8AQ9HCN3 771 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 FBXO28Q9NVF7 368 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 UBE2J1Q9Y385 318 aaPredicted RBP5.01□□□□□ -1.61
ITGB1-214ENST00000488427 PCDHGB2Q9Y5G2 931 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 UGGT2Q9NYU1 1516 aa5.01□□□□□ -1.61
ITGB1-214ENST00000488427 COL16A1Q07092 1604 aaPredicted RBP5.01□□□□□ -1.61
ITGB1-214ENST00000488427 REREQ9P2R6 1566 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 A0A087WZ62 844 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 GOLGA6L3A6NEY3 463 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 PPP6CO00743 305 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 SKAP2O75563 359 aaPredicted RBP5□□□□□ -1.61
ITGB1-214ENST00000488427 ARP10275 920 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 APEHP13798 732 aaKnown RBP5□□□□□ -1.61
ITGB1-214ENST00000488427 DUSP1P28562 367 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 TACR3P29371 465 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 HTR7P34969 479 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 PPM1AP35813 382 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 TNFAIP2Q03169 654 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 BFSP2Q13515 415 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 DNASE1L3Q13609 305 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 MFSD13AQ14CX5 517 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 RAB30Q15771 203 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 CNGA3Q16281 694 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 SYCP2LQ5T4T6 812 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 MORC1Q86VD1 984 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 GLIS1Q8NBF1 620 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 KIAA1191Q96A73 305 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 EDC3Q96F86 508 aaKnown RBP5□□□□□ -1.61
ITGB1-214ENST00000488427 FAR2Q96K12 515 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 RITA1Q96K30 269 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 MACROD1Q9BQ69 325 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 ARL8BQ9NVJ2 186 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 FZD4Q9ULV1 537 aa5□□□□□ -1.61
ITGB1-214ENST00000488427 CLTCQ00610 1675 aaKnown RBP4.99□□□□□ -1.61
ITGB1-214ENST00000488427 ADGBQ8N7X0 1667 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 ITSN2Q9NZM3 1697 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 DEPDC5O75140 1603 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 PNMA6EA0A0J9YXQ4 647 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 TISP43B9A030 160 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 CLIC1O00299 241 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 FFAR2O15552 330 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 CD63P08962 238 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 CYP2A6P11509 494 aaPredicted RBP4.99□□□□□ -1.61
ITGB1-214ENST00000488427 ABCB4P21439 1286 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 MCM5P33992 734 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 PLCD1P51178 756 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 RBM6P78332 1123 aaKnown RBP4.99□□□□□ -1.61
ITGB1-214ENST00000488427 GPC5P78333 572 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 FAM110CQ1W6H9 321 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 TRIM71Q2Q1W2 868 aaKnown RBP4.99□□□□□ -1.61
ITGB1-214ENST00000488427 AASDHQ4L235 1098 aaPredicted RBP4.99□□□□□ -1.61
ITGB1-214ENST00000488427 TMEM196Q5HYL7 178 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 CCDC144NLQ6NUI1 221 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 RANBP10Q6VN20 620 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 UEVLDQ8IX04 471 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 SRRM1Q8IYB3 904 aaKnown RBP4.99□□□□□ -1.61
ITGB1-214ENST00000488427 GALNT16Q8N428 558 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 ZNF527Q8NB42 609 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 OR52L2PQ8NGH6 319 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 TRIM2Q9C040 744 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 FRMD4BQ9Y2L6 1034 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 DIP2CQ9Y2E4 1556 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 CAMTA1Q9Y6Y1 1673 aa4.99□□□□□ -1.61
ITGB1-214ENST00000488427 CYP2D6P10635 497 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 PECAM1P16284 738 aaPredicted RBP4.98□□□□□ -1.61
ITGB1-214ENST00000488427 EPHB2P29323 1055 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 IGHMBP2P38935 993 aaKnown RBP4.98□□□□□ -1.61
ITGB1-214ENST00000488427 PBX1P40424 430 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 PRELPP51888 382 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 WDR5P61964 334 aaKnown RBP4.98□□□□□ -1.61
ITGB1-214ENST00000488427 HSF1Q00613 529 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 GHRHRQ02643 423 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 TFF2Q03403 129 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 ICA1Q05084 483 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 MTAPQ13126 283 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 MORC3Q14149 939 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 ARHGAP15Q53QZ3 475 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 RAP1GAP2Q684P5 730 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 C1orf228Q6PIY5 440 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 NEK8Q86SG6 692 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 C8orf58Q8NAV2 365 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 ADPRHL1Q8NDY3 354 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 OSR1Q8TAX0 266 aaPredicted RBP4.98□□□□□ -1.61
ITGB1-214ENST00000488427 RSC1A1Q92681 617 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 PRPF18Q99633 342 aaKnown RBP4.98□□□□□ -1.61
ITGB1-214ENST00000488427 GDF15Q99988 308 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 SENP7Q9BQF6 1050 aa4.98□□□□□ -1.61
ITGB1-214ENST00000488427 TTLL2Q9BWV7 592 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms