RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 OLAHQ9NV23 265 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 IGSF9Q9P2J2 1179 aa10.96□□□□□ -0.65
CCDC171-208ENST00000486641 PRPF19Q9UMS4 504 aaKnown RBP10.96□□□□□ -0.65
CCDC171-208ENST00000486641 SLC15A5A6NIM6 579 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 APOC4-APOC2K7ER74 178 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 DHX15O43143 795 aaKnown RBP10.96□□□□□ -0.66
CCDC171-208ENST00000486641 RNASEH2AO75792 299 aaKnown RBP10.96□□□□□ -0.66
CCDC171-208ENST00000486641 APOC2P02655 101 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 FUCA1P04066 466 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 SERPINE1P05121 402 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 OCM2P0CE71 109 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 OCMP0CE72 109 aaPredicted RBP10.96□□□□□ -0.66
CCDC171-208ENST00000486641 PTPN1P18031 435 aaKnown RBP10.96□□□□□ -0.66
CCDC171-208ENST00000486641 OSBPP22059 807 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 SERPINB5P36952 375 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 CDH15P55291 814 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 TXNL4AP83876 142 aaKnown RBP10.96□□□□□ -0.66
CCDC171-208ENST00000486641 SLC9B1Q4ZJI4 515 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 PIGGQ5H8A4 983 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 FSCBQ5H9T9 825 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 PPP1R2P3Q6NXS1 205 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 CLVS1Q8IUQ0 354 aaPredicted RBP10.96□□□□□ -0.66
CCDC171-208ENST00000486641 WDTC1Q8N5D0 677 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 KCTD6Q8NC69 237 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 USP13Q92995 863 aaPredicted RBP10.96□□□□□ -0.66
CCDC171-208ENST00000486641 KLHL32Q96NJ5 620 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 NEURL2Q9BR09 285 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 ARMC7Q9H6L4 198 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 COG4Q9H9E3 785 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 KCNH7Q9NS40 1196 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 TBC1D23Q9NUY8 699 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 PCSK1NQ9UHG2 260 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 CNTN6Q9UQ52 1028 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 NUB1Q9Y5A7 615 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 SQORQ9Y6N5 450 aa10.96□□□□□ -0.66
CCDC171-208ENST00000486641 ARHGEF37A1IGU5 675 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 DDTLA6NHG4 134 aaPredicted RBP10.95□□□□□ -0.66
CCDC171-208ENST00000486641 FAM159BA6NKW6 160 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 CFLARO15519 480 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 PLIN3O60664 434 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 KRT7P08729 469 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 P4HA1P13674 534 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 HSPA1LP34931 641 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 BCAP31P51572 246 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 CACNB3P54284 484 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 ABCE1P61221 599 aaKnown RBP10.95□□□□□ -0.66
CCDC171-208ENST00000486641 ROR1Q01973 937 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 SLC10A2Q12908 348 aaPredicted RBP10.95□□□□□ -0.66
CCDC171-208ENST00000486641 CEACAM7Q14002 265 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 XKR9Q5GH70 373 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 PPM1LQ5SGD2 360 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 STXBP5Q5T5C0 1151 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 TIFABQ6ZNK6 161 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 GPR180Q86V85 440 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 JOSD2Q8TAC2 188 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 C12orf43Q96C57 262 aaKnown RBP10.95□□□□□ -0.66
CCDC171-208ENST00000486641 ISOC1Q96CN7 298 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 FAM96AQ9H5X1 160 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 COQ10BQ9H8M1 238 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 CNOT11Q9UKZ1 510 aaKnown RBP10.95□□□□□ -0.66
CCDC171-208ENST00000486641 MYRFQ9Y2G1 1151 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 AFG3L2Q9Y4W6 797 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 FADS3Q9Y5Q0 445 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 HNRNPDLO14979 420 aaKnown RBP10.95□□□□□ -0.66
CCDC171-208ENST00000486641 ITGBL1O95965 494 aaPredicted RBP10.95□□□□□ -0.66
CCDC171-208ENST00000486641 PRKCGP05129 697 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 RPL10P27635 214 aaKnown RBP10.95□□□□□ -0.66
CCDC171-208ENST00000486641 PPARGP37231 505 aaPredicted RBP10.95□□□□□ -0.66
CCDC171-208ENST00000486641 RAB15P59190 212 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 CLDN10P78369 228 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 JAG1P78504 1218 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 CBLBQ13191 982 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 DMP1Q13316 513 aaPredicted RBP10.95□□□□□ -0.66
CCDC171-208ENST00000486641 OGFOD2Q6N063 350 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 NANOGP8Q6NSW7 305 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 EPGNQ6UW88 154 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 C16orf89Q6UX73 402 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 BNC2Q6ZN30 1099 aaPredicted RBP10.95□□□□□ -0.66
CCDC171-208ENST00000486641 CARM1Q86X55 608 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 MPP5Q8N3R9 675 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 KYQ8NBH2 561 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 RNF169Q8NCN4 708 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 DEPTORQ8TB45 409 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 MAPK15Q8TD08 544 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 TRPC4APQ8TEL6 797 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 EME1Q96AY2 570 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 TMEM79Q9BSE2 394 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 SEMA6AQ9H2E6 1030 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 RNPEPQ9H4A4 650 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 ANLNQ9NQW6 1124 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 KIAA1522Q9P206 1035 aaPredicted RBP10.95□□□□□ -0.66
CCDC171-208ENST00000486641 TMED5Q9Y3A6 229 aa10.95□□□□□ -0.66
CCDC171-208ENST00000486641 STX16-NPEPL1H3BU86 382 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 PSMD12O00232 456 aaPredicted RBP10.94□□□□□ -0.66
CCDC171-208ENST00000486641 PLOD2O00469 737 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 ENTPD3O75355 529 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 DGKIO75912 1065 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 STAMBPO95630 424 aa10.94□□□□□ -0.66
CCDC171-208ENST00000486641 EIF2AK2P19525 551 aaKnown RBP10.94□□□□□ -0.66
CCDC171-208ENST00000486641 HMOX2P30519 316 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms