RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 BHLHE41Q9C0J9 482 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-209ENST00000486618 DUSP15Q9H1R2 295 aaPredicted RBP7.23□□□□□ -1.25
HDAC3-209ENST00000486618 CDT1Q9H211 546 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 DEF6Q9H4E7 631 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 SMOC1Q9H4F8 434 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 TASP1Q9H6P5 420 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 TMEM9BQ9NQ34 198 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 EXOC1Q9NV70 894 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 MKS1Q9NXB0 559 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 RAXQ9Y2V3 346 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 R3HCC1Q9Y3T6 440 aaKnown RBP7.23□□□□□ -1.25
HDAC3-209ENST00000486618 ITIH6Q6UXX5 1313 aa7.23□□□□□ -1.25
HDAC3-209ENST00000486618 CACNA1EQ15878 2313 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 J3KRW8 73 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 TRDMT1O14717 391 aaKnown RBP7.22□□□□□ -1.25
HDAC3-209ENST00000486618 GIPC1O14908 333 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 SGTAO43765 313 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 MTRF1O75570 445 aaKnown RBP7.22□□□□□ -1.25
HDAC3-209ENST00000486618 EDN1P05305 212 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 MCF2P10911 925 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 DESP17661 470 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 DRD1P21728 446 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 MUTP22033 750 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 RPA1P27694 616 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 GABRR2P28476 465 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 CDC25CP30307 473 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 GBP1P32455 592 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 RDXP35241 583 aaKnown RBP7.22□□□□□ -1.25
HDAC3-209ENST00000486618 GUCY2FP51841 1108 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 TNK2Q07912 1038 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 DUSP4Q13115 394 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 GPR17Q13304 367 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 SLC9A5Q14940 896 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 VEPH1Q14D04 833 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 TAF12Q16514 161 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 FBXO43Q4G163 708 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 EARS2Q5JPH6 523 aaKnown RBP7.22□□□□□ -1.25
HDAC3-209ENST00000486618 TCEAL6Q6IPX3 200 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 ARMCX5Q6P1M9 558 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 ABRAXAS1Q6UWZ7 409 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 UNC5DQ6UXZ4 953 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 C1orf122Q6ZSJ8 110 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 DNAJB7Q7Z6W7 309 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-209ENST00000486618 TMC8Q8IU68 726 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 CCDC26Q8TAB7 109 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 ZCCHC14Q8WYQ9 949 aaKnown RBP7.22□□□□□ -1.25
HDAC3-209ENST00000486618 GATA6Q92908 595 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 TCEAL3Q969E4 200 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 PSMG2Q969U7 264 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 FAM46AQ96IP4 442 aaKnown RBP7.22□□□□□ -1.25
HDAC3-209ENST00000486618 ZMAT2Q96NC0 199 aaKnown RBP7.22□□□□□ -1.25
HDAC3-209ENST00000486618 LRRC3BQ96PB8 259 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 PGLYRP2Q96PD5 576 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 MOGAT1Q96PD6 335 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 GBP4Q96PP9 640 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 MTMR9Q96QG7 549 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 KIF2CQ99661 725 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 ACO2Q99798 780 aaKnown RBP7.22□□□□□ -1.25
HDAC3-209ENST00000486618 NCAPGQ9BPX3 1015 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 KIFC3Q9BVG8 833 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 SARGQ9BW04 601 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 SCNM1Q9BWG6 230 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 MRPL4Q9BYD3 311 aaKnown RBP7.22□□□□□ -1.25
HDAC3-209ENST00000486618 TM6SF1Q9BZW5 370 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 SLC32A1Q9H598 525 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 GKN1Q9NS71 199 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 GJB4Q9NTQ9 266 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 MRGBPQ9NV56 204 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 IRAK4Q9NWZ3 460 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 DONSONQ9NYP3 566 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 ARHGAP28Q9P2N2 729 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 HSFX1Q9UBD0 423 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 ORC3Q9UBD5 711 aaPredicted RBP7.22□□□□□ -1.25
HDAC3-209ENST00000486618 CFAP45Q9UL16 551 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 RNF112Q9ULX5 631 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 WASF3Q9UPY6 502 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 PLAAQ9Y263 795 aa7.22□□□□□ -1.25
HDAC3-209ENST00000486618 LNP1A1A4G5 178 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 ANO9A1A5B4 782 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 CCDC169A6NNP5 214 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 M0QZQ0 153 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 NDUFB5O43674 189 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 MED24O75448 989 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 APBB3O95704 486 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 SPINK2P20155 84 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 SERPINB3P29508 390 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 ATP6V1E1P36543 226 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 RAD52P43351 418 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 TUFMP49411 452 aaKnown RBP7.21□□□□□ -1.26
HDAC3-209ENST00000486618 PAPOLAP51003 745 aaKnown RBP7.21□□□□□ -1.26
HDAC3-209ENST00000486618 CSE1LP55060 971 aaKnown RBP7.21□□□□□ -1.26
HDAC3-209ENST00000486618 GABREP78334 506 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 MRPS35P82673 323 aaKnown RBP7.21□□□□□ -1.26
HDAC3-209ENST00000486618 RING1Q06587 406 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 C19orf57Q0VDD7 668 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 SCRN1Q12765 414 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 SQSTM1Q13501 440 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 PIN1Q13526 163 aaPredicted RBP7.21□□□□□ -1.26
HDAC3-209ENST00000486618 RUNX3Q13761 415 aa7.21□□□□□ -1.26
HDAC3-209ENST00000486618 USP39Q53GS9 565 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms