RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 LRRC38Q5VT99 294 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 ARID3BQ8IVW6 561 aaPredicted RBP17.15■□□□□ 0.34
THBS3-207ENST00000486260 TTC16Q8NEE8 873 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 ZSCAN18Q8TBC5 510 aaPredicted RBP17.15■□□□□ 0.34
THBS3-207ENST00000486260 SUSD6Q92537 303 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 HSPH1Q92598 858 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 USP13Q92995 863 aaPredicted RBP17.15■□□□□ 0.34
THBS3-207ENST00000486260 PLD4Q96BZ4 506 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 KLHL11Q9NVR0 708 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 TMEM51Q9NW97 253 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 XPO7Q9UIA9 1087 aaKnown RBP17.15■□□□□ 0.34
THBS3-207ENST00000486260 ARHGAP26Q9UNA1 814 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 CCDC66A2RUB6 948 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 PRAMEF12O95522 483 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 APOEP02649 317 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 PEX5P50542 639 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 CA9Q16790 459 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 ARL13BQ3SXY8 428 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 ZFYVE27Q5T4F4 411 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 POLNQ7Z5Q5 900 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 UNC45BQ8IWX7 931 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 UBL4BQ8N7F7 174 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 ALG3Q92685 438 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 HLA-CQ95604 372 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 NTAN1Q96AB6 310 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 MYADMQ96S97 322 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 TDP1Q9NUW8 608 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 GDE1Q9NZC3 331 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 AP4E1Q9UPM8 1137 aa17.15■□□□□ 0.34
THBS3-207ENST00000486260 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.15■□□□□ 0.34
THBS3-207ENST00000486260 CTAGE9A4FU28 777 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 GRXCR2A6NFK2 248 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 LEFTY2O00292 366 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 SCAMP3O14828 347 aaKnown RBP17.14■□□□□ 0.33
THBS3-207ENST00000486260 KLKB1P03952 638 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 CASQ1P31415 396 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 HARS2P49590 506 aaKnown RBP17.14■□□□□ 0.33
THBS3-207ENST00000486260 NUGGCQ68CJ6 796 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 PYROXD2Q8N2H3 581 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 SH3RF2Q8TEC5 729 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 TEKT4Q8WW24 435 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 NECTIN4Q96NY8 510 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 PSMB7Q99436 277 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 NAPGQ99747 312 aaPredicted RBP17.14■□□□□ 0.33
THBS3-207ENST00000486260 DHX35Q9H5Z1 703 aaKnown RBP17.14■□□□□ 0.33
THBS3-207ENST00000486260 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.14■□□□□ 0.33
THBS3-207ENST00000486260 CFAP97Q9P2B7 532 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 CDH7Q9ULB5 785 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 SNX10Q9Y5X0 201 aa17.14■□□□□ 0.33
THBS3-207ENST00000486260 PAGE1O75459 146 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 CORO1AP31146 461 aaKnown RBP17.13■□□□□ 0.33
THBS3-207ENST00000486260 AIF1P55008 147 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 SCAPQ12770 1279 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 EFHC2Q5JST6 749 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 FAM78AQ5JUQ0 283 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 DENND1CQ8IV53 801 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 ATP6V0D2Q8N8Y2 350 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 RIN3Q8TB24 985 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 UBE2Q2Q8WVN8 375 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 RAPGEF5Q92565 580 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 ASB16Q96NS5 453 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 SIK2Q9H0K1 926 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 SLC12A6Q9UHW9 1150 aa17.13■□□□□ 0.33
THBS3-207ENST00000486260 HELZP42694 1942 aaKnown RBP17.13■□□□□ 0.33
THBS3-207ENST00000486260 PI4K2BG5E9Z4 385 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 KIF2AO00139 706 aaPredicted RBP17.12■□□□□ 0.33
THBS3-207ENST00000486260 MBTPS2O43462 519 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 GREM1O60565 184 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 GBP2P32456 591 aaPredicted RBP17.12■□□□□ 0.33
THBS3-207ENST00000486260 GGCXP38435 758 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 RWDD2BP57060 319 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 SMAD4Q13485 552 aaKnown RBP17.12■□□□□ 0.33
THBS3-207ENST00000486260 KATNAL2Q8IYT4 538 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 KCTD6Q8NC69 237 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 ST13P5Q8NFI4 369 aaPredicted RBP17.12■□□□□ 0.33
THBS3-207ENST00000486260 ZNF592Q92610 1267 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 BTN2A3PQ96KV6 586 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 HAPLN3Q96S86 360 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 DDX56Q9NY93 547 aaKnown RBP17.12■□□□□ 0.33
THBS3-207ENST00000486260 AGO1Q9UL18 857 aaKnown RBP17.12■□□□□ 0.33
THBS3-207ENST00000486260 SH3BP1Q9Y3L3 701 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 DENND4AQ7Z401 1863 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 KCNK3O14649 394 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 KRT1P04264 644 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 TUBB4AP04350 444 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 CD48P09326 243 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 WEE1P30291 646 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 L1CAMP32004 1257 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 CXCR5P32302 372 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 VIPR2P41587 438 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 CDH6P55285 790 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 ZNF211Q13398 564 aaPredicted RBP17.12■□□□□ 0.33
THBS3-207ENST00000486260 PIK3R6Q5UE93 754 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 DCAF12L1Q5VU92 463 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 PSTKQ8IV42 348 aaKnown RBP17.12■□□□□ 0.33
THBS3-207ENST00000486260 SMARCD2Q92925 531 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 RNF25Q96BH1 459 aaPredicted RBP17.12■□□□□ 0.33
THBS3-207ENST00000486260 KCTD15Q96SI1 283 aaPredicted RBP17.12■□□□□ 0.33
THBS3-207ENST00000486260 HS3ST4Q9Y661 456 aa17.12■□□□□ 0.33
THBS3-207ENST00000486260 UNC80Q8N2C7 3258 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms