RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 PTPN20Q4JDL3 420 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 ZC3H12AQ5D1E8 599 aaKnown RBP13.01□□□□□ -0.33
PTCD1-205ENST00000485746 FAM102AQ5T9C2 384 aaPredicted RBP13.01□□□□□ -0.33
PTCD1-205ENST00000485746 FYB2Q5VWT5 728 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 NAA35Q5VZE5 725 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 PHTF2Q8N3S3 785 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 ATP6V0D2Q8N8Y2 350 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 IL17RCQ8NAC3 791 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 KCNV2Q8TDN2 545 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 EPS8L1Q8TE68 723 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 NELL1Q92832 810 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 FUCA2Q9BTY2 467 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 HSD3B7Q9H2F3 369 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 ZDHHC4Q9NPG8 344 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 RTN4Q9NQC3 1192 aaKnown RBP13.01□□□□□ -0.33
PTCD1-205ENST00000485746 DDIT4Q9NX09 232 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 STIM2Q9P246 746 aa13.01□□□□□ -0.33
PTCD1-205ENST00000485746 BCCIPQ9P287 314 aaKnown RBP eCLIP13.01□□□□□ -0.33
PTCD1-205ENST00000485746 HELZP42694 1942 aaKnown RBP13.01□□□□□ -0.33
PTCD1-205ENST00000485746 KIF26AQ9ULI4 1882 aaPredicted RBP13□□□□□ -0.33
PTCD1-205ENST00000485746 ANTXRLA6NF34 631 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 IRAK2O43187 625 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 LILRB5O75023 590 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 CAVIN2O95810 425 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 PENKP01210 267 aaPredicted RBP13□□□□□ -0.33
PTCD1-205ENST00000485746 CISD3P0C7P0 127 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 SLC2A3P11169 496 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 ABCB4P21439 1286 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 NTSR1P30989 418 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 HOXA6P31267 233 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 NOS2P35228 1153 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 JAM2P57087 298 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 CDR2Q01850 454 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 NME3Q13232 169 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 IQCB1Q15051 598 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 E2F5Q15329 346 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 ANO7Q6IWH7 933 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 RFWD3Q6PCD5 774 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 TRIM72Q6ZMU5 477 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 SND1Q7KZF4 910 aaKnown RBP eCLIP13□□□□□ -0.33
PTCD1-205ENST00000485746 ANKS1BQ7Z6G8 1248 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 LUZP1Q86V48 1076 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 CHSY1Q86X52 802 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 CHPFQ8IZ52 775 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 SLC20A1Q8WUM9 679 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 DDX1Q92499 740 aaKnown RBP13□□□□□ -0.33
PTCD1-205ENST00000485746 AZIN2Q96A70 460 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 PIWIL1Q96J94 861 aaKnown RBP13□□□□□ -0.33
PTCD1-205ENST00000485746 FCRL2Q96LA5 508 aaPredicted RBP13□□□□□ -0.33
PTCD1-205ENST00000485746 SLC2A13Q96QE2 648 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 SLC2A11Q9BYW1 496 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 CIPCQ9C0C6 399 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13□□□□□ -0.33
PTCD1-205ENST00000485746 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13□□□□□ -0.33
PTCD1-205ENST00000485746 GMEB2Q9UKD1 530 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 STAP1Q9ULZ2 295 aa13□□□□□ -0.33
PTCD1-205ENST00000485746 SMG5Q9UPR3 1016 aaKnown RBP13□□□□□ -0.33
PTCD1-205ENST00000485746 PRRT4C9JH25 899 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 M0QYT0 321 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 SGK1O00141 431 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 HRO43593 1189 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 DAB1O75553 588 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 RPP40O75818 363 aaKnown RBP12.99□□□□□ -0.33
PTCD1-205ENST00000485746 IGLV3-27P01718 113 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 FERP16591 822 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 HOXC13P31276 330 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 CCR1P32246 355 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 CDH5P33151 784 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-205ENST00000485746 KIR2DL1P43626 348 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-205ENST00000485746 SULT1E1P49888 294 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 SRSF5Q13243 272 aaKnown RBP12.99□□□□□ -0.33
PTCD1-205ENST00000485746 CRY1Q16526 586 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 USP39Q53GS9 565 aaKnown RBP12.99□□□□□ -0.33
PTCD1-205ENST00000485746 EGFLAMQ63HQ2 1017 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 OLFML1Q6UWY5 402 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 SLC26A9Q7LBE3 791 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 APTXQ7Z2E3 356 aaKnown RBP12.99□□□□□ -0.33
PTCD1-205ENST00000485746 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-205ENST00000485746 FAM217AQ8IXS0 508 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 LGI2Q8N0V4 545 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 CARNMT1Q8N4J0 409 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 HJURPQ8NCD3 748 aaPredicted RBP12.99□□□□□ -0.33
PTCD1-205ENST00000485746 ERLEC1Q96DZ1 483 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 RRN3Q9NYV6 651 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 STOML2Q9UJZ1 356 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 FBXO10Q9UK96 956 aa12.99□□□□□ -0.33
PTCD1-205ENST00000485746 F5P12259 2224 aa12.98□□□□□ -0.33
PTCD1-205ENST00000485746 CCDC163A0A0D9SF12 145 aa12.98□□□□□ -0.33
PTCD1-205ENST00000485746 TCRBV21S2A2A0A5A6 115 aa12.98□□□□□ -0.33
PTCD1-205ENST00000485746 TIMM44O43615 452 aa12.98□□□□□ -0.33
PTCD1-205ENST00000485746 HOXB2P14652 356 aa12.98□□□□□ -0.33
PTCD1-205ENST00000485746 TNFAIP3P21580 790 aa12.98□□□□□ -0.33
PTCD1-205ENST00000485746 HOXD9P28356 352 aaPredicted RBP12.98□□□□□ -0.33
PTCD1-205ENST00000485746 SLC6A4P31645 630 aa12.98□□□□□ -0.33
PTCD1-205ENST00000485746 NSFP46459 744 aaKnown RBP12.98□□□□□ -0.33
PTCD1-205ENST00000485746 GABRB2P47870 512 aa12.98□□□□□ -0.33
PTCD1-205ENST00000485746 UBASH3AP57075 661 aa12.98□□□□□ -0.33
PTCD1-205ENST00000485746 NOMO3P69849 1222 aa12.98□□□□□ -0.33
PTCD1-205ENST00000485746 PITX1P78337 314 aaPredicted RBP12.98□□□□□ -0.33
PTCD1-205ENST00000485746 FANCCQ00597 558 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms