RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 PPP3CBP16298 524 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 THBS4P35443 961 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 EIF4A1P60842 406 aaKnown RBP4.9□□□□□ -1.63
XPA-203ENST00000485042 FAM189BP81408 668 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.9□□□□□ -1.63
XPA-203ENST00000485042 MTAPQ13126 283 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 SEMA3BQ13214 749 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 ST3GAL2Q16842 350 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 TBRG1Q3YBR2 411 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 RABL3Q5HYI8 236 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 ANKRD40Q6AI12 368 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 CCDC144NLQ6NUI1 221 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 CFAP161Q6P656 301 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 LCNL1Q6ZST4 164 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 RAB11FIP4Q86YS3 637 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 C1QL4Q86Z23 238 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 SIAH1Q8IUQ4 282 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 LRRC71Q8N4P6 559 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 CCDC89Q8N998 374 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 FSIP1Q8NA03 581 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 USP38Q8NB14 1042 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 Q8TCH9 128 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 STAMQ92783 540 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 ZUFSPQ96AP4 578 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 RBM17Q96I25 401 aaKnown RBP4.9□□□□□ -1.63
XPA-203ENST00000485042 PAIP1Q9H074 479 aaKnown RBP4.9□□□□□ -1.63
XPA-203ENST00000485042 ABHD16BQ9H3Z7 469 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 SERHL2Q9H4I8 314 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 ZNF768Q9H5H4 540 aaKnown RBP4.9□□□□□ -1.63
XPA-203ENST00000485042 TMLHEQ9NVH6 421 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 AASSQ9UDR5 926 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 TBX20Q9UMR3 447 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 AFG3L2Q9Y4W6 797 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 MAP3K1Q13233 1512 aa4.9□□□□□ -1.63
XPA-203ENST00000485042 CHD2O14647 1828 aaKnown RBP4.9□□□□□ -1.63
XPA-203ENST00000485042 EIF2AK4Q9P2K8 1649 aaKnown RBP4.9□□□□□ -1.63
XPA-203ENST00000485042 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 A1L4Q6 167 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 VWA3AA6NCI4 1184 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 FAM90A20PA6NIJ5 464 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 SLC38A8A6NNN8 435 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 GRXCR1A8MXD5 290 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 KIAA0355O15063 1070 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 SLC16A3O15427 465 aaKnown RBP4.89□□□□□ -1.63
XPA-203ENST00000485042 CTIFO43310 598 aaKnown RBP4.89□□□□□ -1.63
XPA-203ENST00000485042 FAM20BO75063 409 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 CDKL5O76039 1030 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 DDX6P26196 483 aaKnown RBP eCLIP4.89□□□□□ -1.63
XPA-203ENST00000485042 LIPAP38571 399 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 DGKQP52824 942 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 ATXN1P54253 815 aaKnown RBP4.89□□□□□ -1.63
XPA-203ENST00000485042 CASP6P55212 293 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 KCTD2Q14681 263 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 SLC9C2Q5TAH2 1124 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 ARMC6Q6NXE6 501 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 ANKRD44Q8N8A2 993 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 CPEB3Q8NE35 698 aaKnown RBP4.89□□□□□ -1.63
XPA-203ENST00000485042 OVCA2Q8WZ82 227 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 R3HDM4Q96D70 268 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 VPS50Q96JG6 964 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 ADOQ96SZ5 270 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 RMI1Q9H9A7 625 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 TBC1D22BQ9NU19 505 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 TMEM74BQ9NUR3 256 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 RAB21Q9UL25 225 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 JAG2Q9Y219 1238 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 UBE2J1Q9Y385 318 aaPredicted RBP4.89□□□□□ -1.63
XPA-203ENST00000485042 RABGAP1Q9Y3P9 1069 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 ARHGEF5Q12774 1597 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 TMEM94Q12767 1356 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 CEP162Q5TB80 1403 aa4.89□□□□□ -1.63
XPA-203ENST00000485042 ARHGAP23Q9P227 1491 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 SLIT1O75093 1534 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 LRP6O75581 1613 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 COL16A1Q07092 1604 aaPredicted RBP4.88□□□□□ -1.63
XPA-203ENST00000485042 OTOL1A6NHN0 477 aaPredicted RBP4.88□□□□□ -1.63
XPA-203ENST00000485042 MARCH11A6NNE9 402 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 KLK10O43240 276 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 PRICKLE3O43900 615 aaPredicted RBP4.88□□□□□ -1.63
XPA-203ENST00000485042 DDX58O95786 925 aaKnown RBP4.88□□□□□ -1.63
XPA-203ENST00000485042 PGM1P36871 562 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 CLCN2P51788 898 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 ITIH3Q06033 890 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 CBFBQ13951 182 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 TOMM20Q15388 145 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 BEAN1Q3B7T3 259 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 AASDHQ4L235 1098 aaPredicted RBP4.88□□□□□ -1.63
XPA-203ENST00000485042 ZNF484Q5JVG2 852 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 TREML2Q5T2D2 321 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 GPATCH4Q5T3I0 446 aaKnown RBP4.88□□□□□ -1.63
XPA-203ENST00000485042 ITPRIPL1Q6GPH6 555 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 ACAD10Q6JQN1 1059 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 RASGRP2Q7LDG7 609 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 MAVSQ7Z434 540 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 DTX2Q86UW9 622 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 PDILTQ8N807 584 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 FAM71DQ8N9W8 422 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 TOR1AIP2Q8NFQ8 470 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 UBE2Q2Q8WVN8 375 aa4.88□□□□□ -1.63
XPA-203ENST00000485042 XAGE5Q8WWM1 108 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms