RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 PRDM16Q9HAZ2 1276 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 ITM2CQ9NQX7 267 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 HESX1Q9UBX0 185 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 PCDHB4Q9Y5E5 795 aa18.82■□□□□ 0.6
ATG4B-221ENST00000483778 MUC22E2RYF6 1773 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-221ENST00000483778 CHD6Q8TD26 2715 aa18.81■□□□□ 0.6
ATG4B-221ENST00000483778 IGF2RP11717 2491 aa18.81■□□□□ 0.6
ATG4B-221ENST00000483778 SPAARA0A1B0GVQ0 90 aa18.81■□□□□ 0.6
ATG4B-221ENST00000483778 BIN1O00499 593 aa18.81■□□□□ 0.6
ATG4B-221ENST00000483778 ZBTB24O43167 697 aaPredicted RBP18.81■□□□□ 0.6
ATG4B-221ENST00000483778 HLA-EP13747 358 aa18.81■□□□□ 0.6
ATG4B-221ENST00000483778 COPAP53621 1224 aa18.81■□□□□ 0.6
ATG4B-221ENST00000483778 SLC8A3P57103 927 aa18.81■□□□□ 0.6
ATG4B-221ENST00000483778 SEMA3BQ13214 749 aa18.81■□□□□ 0.6
ATG4B-221ENST00000483778 TMPRSS6Q8IU80 811 aa18.81■□□□□ 0.6
ATG4B-221ENST00000483778 WFDC5Q8TCV5 224 aa18.81■□□□□ 0.6
ATG4B-221ENST00000483778 TOE1Q96GM8 510 aaKnown RBP18.81■□□□□ 0.6
ATG4B-221ENST00000483778 IPO9Q96P70 1041 aaKnown RBP18.81■□□□□ 0.6
ATG4B-221ENST00000483778 CIPCQ9C0C6 399 aa18.81■□□□□ 0.6
ATG4B-221ENST00000483778 WSB2Q9NYS7 404 aaPredicted RBP18.81■□□□□ 0.6
ATG4B-221ENST00000483778 USP36Q9P275 1121 aaKnown RBP18.81■□□□□ 0.6
ATG4B-221ENST00000483778 TMEM131Q92545 1883 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 CABIN1Q9Y6J0 2220 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 C1QTNF9BB2RNN3 333 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 NDUFS2O75306 463 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 CYBBP04839 570 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 FYNP06241 537 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 C1QTNF9P0C862 333 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 NCAM1P13591 858 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 HLA-FP30511 346 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 HOXD12P35452 270 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 TPMTP51580 245 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 STX17P56962 302 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 GFPT1Q06210 699 aaPredicted RBP18.8■□□□□ 0.6
ATG4B-221ENST00000483778 CNGA2Q16280 664 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 RFWD3Q6PCD5 774 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 ANKS1BQ7Z6G8 1248 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 CACUL1Q86Y37 369 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 PPM1KQ8N3J5 372 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 ZNF366Q8N895 744 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 CEP76Q8TAP6 659 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 RNF139Q8WU17 664 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 CYB5D2Q8WUJ1 264 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 NELFBQ8WX92 580 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 MYEOVQ96EZ4 313 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 CEP63Q96MT8 703 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 KREMEN1Q96MU8 473 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 NT5C1BQ96P26 610 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 GPR174Q9BXC1 333 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 SLC2A11Q9BYW1 496 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 KIAA1257Q9ULG3 409 aa18.8■□□□□ 0.6
ATG4B-221ENST00000483778 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.8■□□□□ 0.6
ATG4B-221ENST00000483778 HBS1LQ9Y450 684 aaKnown RBP18.8■□□□□ 0.6
ATG4B-221ENST00000483778 ARHGAP33O14559 1287 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 PSMA7O14818 248 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 PMM2O15305 246 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 PAEPP09466 180 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 SETSIPP0DME0 302 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 CD59P13987 128 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 TBXAS1P24557 533 aaPredicted RBP18.79■□□□□ 0.6
ATG4B-221ENST00000483778 CD6P30203 668 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 SLC6A4P31645 630 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 HARS2P49590 506 aaKnown RBP18.79■□□□□ 0.6
ATG4B-221ENST00000483778 YWHAEP62258 255 aaKnown RBP18.79■□□□□ 0.6
ATG4B-221ENST00000483778 NUCB2P80303 420 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 CCDC40Q4G0X9 1142 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 MPPE1Q53F39 396 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 ADGRF1Q5T601 910 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 METTL3Q86U44 580 aaKnown RBP18.79■□□□□ 0.6
ATG4B-221ENST00000483778 ADIPOR2Q86V24 386 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 RGL4Q8IZJ4 473 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 SIX6OS1Q8N1H7 587 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 SCML4Q8N228 414 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 MINDY1Q8N5J2 469 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 TMA16Q96EY4 203 aaKnown RBP18.79■□□□□ 0.6
ATG4B-221ENST00000483778 CAMK1GQ96NX5 476 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 METTL14Q9HCE5 456 aaKnown RBP18.79■□□□□ 0.6
ATG4B-221ENST00000483778 CNGB3Q9NQW8 809 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 ABCC13Q9NSE7 274 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 OLA1Q9NTK5 396 aaKnown RBP18.79■□□□□ 0.6
ATG4B-221ENST00000483778 STOML2Q9UJZ1 356 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 CTNND2Q9UQB3 1225 aa18.79■□□□□ 0.6
ATG4B-221ENST00000483778 ZZEF1O43149 2961 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 IGLV3-27P01718 113 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 MORC3Q14149 939 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 STARD3Q14849 445 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 NADSYN1Q6IA69 706 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 MSANTD2Q6P1R3 559 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 KIAA0907Q7Z7F0 614 aaPredicted RBP18.78■□□□□ 0.6
ATG4B-221ENST00000483778 EHBP1Q8NDI1 1231 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 UCMAQ8WVF2 138 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 SIPA1Q96FS4 1042 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 TMEM121BQ9BXQ6 578 aaPredicted RBP18.78■□□□□ 0.6
ATG4B-221ENST00000483778 MIS12Q9H081 205 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 MTG2Q9H4K7 406 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 ABCB8Q9NUT2 735 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 SLCO1B1Q9Y6L6 691 aa18.78■□□□□ 0.6
ATG4B-221ENST00000483778 M0QYV0 167 aa18.77■□□□□ 0.6
ATG4B-221ENST00000483778 SYNCRIPO60506 623 aaKnown RBP18.77■□□□□ 0.6
ATG4B-221ENST00000483778 GJB3O75712 270 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms