RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 PCDHGA1Q9Y5H4 931 aa18.2■□□□□ 0.5
RXRB-203ENST00000481441 RAI2Q9Y5P3 530 aa18.2■□□□□ 0.5
RXRB-203ENST00000481441 PLXNA2O75051 1894 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 SEMA4FO95754 770 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 CYBBP04839 570 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 HMBSP08397 361 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 RALAP11233 206 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 CD27P26842 260 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 ASPAP45381 313 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 IL9RQ01113 521 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 SGSM1Q2NKQ1 1148 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 CPXM2Q8N436 756 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 CYFIP2Q96F07 1278 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 TMEM245Q9H330 911 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 RASAL2Q9UJF2 1139 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 USP3Q9Y6I4 520 aa18.19■□□□□ 0.5
RXRB-203ENST00000481441 CFAP46Q8IYW2 2715 aa18.18■□□□□ 0.5
RXRB-203ENST00000481441 DFNA5O60443 496 aa18.18■□□□□ 0.5
RXRB-203ENST00000481441 CLDN6P56747 220 aa18.18■□□□□ 0.5
RXRB-203ENST00000481441 AMPD3Q01432 767 aa18.18■□□□□ 0.5
RXRB-203ENST00000481441 INAVAQ3KP66 663 aa18.18■□□□□ 0.5
RXRB-203ENST00000481441 ZACNQ401N2 412 aa18.18■□□□□ 0.5
RXRB-203ENST00000481441 DENND1CQ8IV53 801 aa18.18■□□□□ 0.5
RXRB-203ENST00000481441 FAM217AQ8IXS0 508 aa18.18■□□□□ 0.5
RXRB-203ENST00000481441 TAF4BQ92750 862 aa18.18■□□□□ 0.5
RXRB-203ENST00000481441 CDK5RAP1Q96SZ6 601 aaKnown RBP18.18■□□□□ 0.5
RXRB-203ENST00000481441 C7orf25Q9BPX7 421 aa18.18■□□□□ 0.5
RXRB-203ENST00000481441 BTBD1Q9H0C5 482 aa18.18■□□□□ 0.5
RXRB-203ENST00000481441 CUEDC2Q9H467 287 aa18.18■□□□□ 0.5
RXRB-203ENST00000481441 TFIP11Q9UBB9 837 aaKnown RBP18.18■□□□□ 0.5
RXRB-203ENST00000481441 A0A1B0GTQ1 180 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 STX6O43752 255 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 FSBPO95073 299 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 ASS1P00966 412 aaKnown RBP18.17■□□□□ 0.5
RXRB-203ENST00000481441 RPN1P04843 607 aaKnown RBP18.17■□□□□ 0.5
RXRB-203ENST00000481441 JUPP14923 745 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 HNF1BP35680 557 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 RPS14P62263 151 aaKnown RBP18.17■□□□□ 0.5
RXRB-203ENST00000481441 DLG4P78352 724 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 ARID5AQ03989 594 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 ZBTB16Q05516 673 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 INCA1Q0VD86 236 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 EFEMP1Q12805 493 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 KNOP1Q1ED39 458 aaKnown RBP18.17■□□□□ 0.5
RXRB-203ENST00000481441 C6orf118Q5T5N4 469 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 SPOPLQ6IQ16 392 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 LRRC69Q6ZNQ3 347 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 UNC13DQ70J99 1090 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 ZNF843Q8N446 348 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 ZNF366Q8N895 744 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 DDI1Q8WTU0 396 aa18.17■□□□□ 0.5
RXRB-203ENST00000481441 FCRL3Q96P31 734 aaPredicted RBP18.17■□□□□ 0.5
RXRB-203ENST00000481441 MAST4O15021 2626 aa18.16■□□□□ 0.5
RXRB-203ENST00000481441 ENC1O14682 589 aa18.16■□□□□ 0.5
RXRB-203ENST00000481441 PDCP20941 246 aa18.16■□□□□ 0.5
RXRB-203ENST00000481441 ANP32AP39687 249 aaKnown RBP18.16■□□□□ 0.5
RXRB-203ENST00000481441 BCAT1P54687 386 aa18.16■□□□□ 0.5
RXRB-203ENST00000481441 SEMG2Q02383 582 aa18.16■□□□□ 0.5
RXRB-203ENST00000481441 RTP5Q14D33 572 aa18.16■□□□□ 0.5
RXRB-203ENST00000481441 ZNF605Q86T29 641 aa18.16■□□□□ 0.5
RXRB-203ENST00000481441 GATAD2AQ86YP4 633 aa18.16■□□□□ 0.5
RXRB-203ENST00000481441 DHX58Q96C10 678 aa18.16■□□□□ 0.5
RXRB-203ENST00000481441 FBRSQ9HAH7 460 aa18.16■□□□□ 0.5
RXRB-203ENST00000481441 CBX4O00257 560 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 VILLO15195 856 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 IGHV4-34P06331 123 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 C1SP09871 688 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 TRIM21P19474 475 aaKnown RBP18.15■□□□□ 0.5
RXRB-203ENST00000481441 HOXD9P28356 352 aaPredicted RBP18.15■□□□□ 0.5
RXRB-203ENST00000481441 HLA-FP30511 346 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 PDE4CQ08493 712 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 DNAJC3Q13217 504 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 FNDC3BQ53EP0 1204 aaKnown RBP18.15■□□□□ 0.5
RXRB-203ENST00000481441 ADAT2Q7Z6V5 191 aaKnown RBP18.15■□□□□ 0.5
RXRB-203ENST00000481441 CYB5D2Q8WUJ1 264 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 NT5C1AQ9BXI3 368 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 DUSP16Q9BY84 665 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 ACE2Q9BYF1 805 aaPredicted RBP18.15■□□□□ 0.5
RXRB-203ENST00000481441 NRSN2Q9GZP1 204 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 SGK2Q9HBY8 427 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 SLC39A2Q9NP94 309 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 PRSS16Q9NQE7 514 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 DMAC2Q9NW81 257 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 MARCH2Q9P0N8 246 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 AK5Q9Y6K8 562 aa18.15■□□□□ 0.5
RXRB-203ENST00000481441 RRP8O43159 456 aaKnown RBP18.14■□□□□ 0.49
RXRB-203ENST00000481441 RFPL3O75679 317 aa18.14■□□□□ 0.49
RXRB-203ENST00000481441 DNTTP04053 509 aa18.14■□□□□ 0.49
RXRB-203ENST00000481441 CDK4P11802 303 aa18.14■□□□□ 0.49
RXRB-203ENST00000481441 CASP1P29466 404 aa18.14■□□□□ 0.49
RXRB-203ENST00000481441 NASPP49321 788 aaPredicted RBP18.14■□□□□ 0.49
RXRB-203ENST00000481441 RACK1P63244 317 aaKnown RBP18.14■□□□□ 0.49
RXRB-203ENST00000481441 TARDBPQ13148 414 aaKnown RBP eCLIP18.14■□□□□ 0.49
RXRB-203ENST00000481441 CUL4AQ13619 759 aa18.14■□□□□ 0.49
RXRB-203ENST00000481441 SHBQ15464 509 aa18.14■□□□□ 0.49
RXRB-203ENST00000481441 PRAMEF14Q5SWL7 426 aa18.14■□□□□ 0.49
RXRB-203ENST00000481441 SV2AQ7L0J3 742 aa18.14■□□□□ 0.49
RXRB-203ENST00000481441 ADIPOR2Q86V24 386 aa18.14■□□□□ 0.49
RXRB-203ENST00000481441 SNIP1Q8TAD8 396 aaKnown RBP18.14■□□□□ 0.49
RXRB-203ENST00000481441 GOLGA5Q8TBA6 731 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms