RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 GRSF1Q12849 480 aaKnown RBP eCLIP9.31□□□□□ -0.92
DDX56-211ENST00000479602 USP4Q13107 963 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 ORC1Q13415 861 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 TSR1Q2NL82 804 aaKnown RBP9.31□□□□□ -0.92
DDX56-211ENST00000479602 PLK5Q496M5 336 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 FBXO43Q4G163 708 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 EFHC1Q5JVL4 640 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 PPP1R15BQ5SWA1 713 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 HEATR6Q6AI08 1181 aaKnown RBP9.31□□□□□ -0.92
DDX56-211ENST00000479602 PLEKHA7Q6IQ23 1121 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 ACAD10Q6JQN1 1059 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 DENND1BQ6P3S1 775 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 PRR23BQ6ZRT6 265 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 GPRIN1Q7Z2K8 1008 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 KBTBD6Q86V97 674 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 DDX42Q86XP3 938 aaKnown RBP eCLIP9.31□□□□□ -0.92
DDX56-211ENST00000479602 TMTC1Q8IUR5 882 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 TMEM139Q8IV31 216 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 SIX6OS1Q8N1H7 587 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 MRPS31Q92665 395 aaKnown RBP9.31□□□□□ -0.92
DDX56-211ENST00000479602 PPP1R13BQ96KQ4 1090 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 P2RY13Q9BPV8 354 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 DUSP15Q9H1R2 295 aaPredicted RBP9.31□□□□□ -0.92
DDX56-211ENST00000479602 LRRC4Q9HBW1 653 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 ABCC13Q9NSE7 274 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.31□□□□□ -0.92
DDX56-211ENST00000479602 NAGPAQ9UK23 515 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 RAB23Q9ULC3 237 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 ARHGAP26Q9UNA1 814 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 PCDHGA5Q9Y5G8 931 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 ATG2BQ96BY7 2078 aa9.31□□□□□ -0.92
DDX56-211ENST00000479602 C2orf78A6NCI8 922 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 ANTXRLA6NF34 631 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 PCNX2A6NKB5 2137 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 BTNL10A8MVZ5 291 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 K7EQS6 105 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 TULP2O00295 520 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 DDX3XO00571 662 aaKnown RBP eCLIP9.3□□□□□ -0.92
DDX56-211ENST00000479602 RNF40O75150 1001 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 RTN2O75298 545 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 RPP40O75818 363 aaKnown RBP9.3□□□□□ -0.92
DDX56-211ENST00000479602 MTA2O94776 668 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 IGLV3-27P01718 113 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 MMEP08473 750 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 USP8P40818 1118 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 OPRD1P41143 372 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 PTPN9P43378 593 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 AMPD2Q01433 879 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 ADIGQ0VDE8 80 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 TAF10Q12962 218 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 MTF1Q14872 753 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 ZNF662Q6ZS27 426 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 RASSF3Q86WH2 238 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 ERICH1Q86X53 443 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 XYLT1Q86Y38 959 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 SCN4BQ8IWT1 228 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 MCOLN2Q8IZK6 566 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 SLC20A1Q8WUM9 679 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 FBXO32Q969P5 355 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 AZIN2Q96A70 460 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 OTUB2Q96DC9 234 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 C18orf8Q96DM3 657 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 PCDHB18PQ96TA0 734 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 NCAPGQ9BPX3 1015 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 RNF38Q9H0F5 515 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 ARRDC1-AS1Q9H2J1 176 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 POPDC2Q9HBU9 364 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 ACP6Q9NPH0 428 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.3□□□□□ -0.92
DDX56-211ENST00000479602 STOML2Q9UJZ1 356 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 TMEM59LQ9UK28 342 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 HBS1LQ9Y450 684 aaKnown RBP9.3□□□□□ -0.92
DDX56-211ENST00000479602 SCINQ9Y6U3 715 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 LAMA5O15230 3695 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 FAM208BQ5VWN6 2430 aa9.3□□□□□ -0.92
DDX56-211ENST00000479602 ATRXP46100 2492 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 A0A0A6YYK5 440 aaPredicted RBP9.29□□□□□ -0.92
DDX56-211ENST00000479602 ANKRD62A6NC57 917 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 EIF3CLB5ME19 914 aaKnown RBP9.29□□□□□ -0.92
DDX56-211ENST00000479602 E5RJQ4 531 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 AXIN1O15169 862 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 DAB1O75553 588 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 ENDOD1O94919 500 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 LTFP02788 710 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 USP17L7P0C7H9 530 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 RALAP11233 206 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 HDCP19113 662 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 PMLP29590 882 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 PXNP49023 591 aaPredicted RBP9.29□□□□□ -0.92
DDX56-211ENST00000479602 AIF1P55008 147 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 YWHAZP63104 245 aaKnown RBP9.29□□□□□ -0.92
DDX56-211ENST00000479602 SHC2P98077 582 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 SLC6A3Q01959 620 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 ACAP1Q15027 740 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 TAF12Q16514 161 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 TDRD12Q587J7 1177 aaKnown RBP9.29□□□□□ -0.92
DDX56-211ENST00000479602 PPM1JQ5JR12 505 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 HECTD3Q5T447 861 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 RNF43Q68DV7 783 aa9.29□□□□□ -0.92
DDX56-211ENST00000479602 ALKBH5Q6P6C2 394 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms