RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 PCBP1Q15365 356 aaKnown RBP eCLIP25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 SNX30Q5VWJ9 437 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 ADGRF2Q8IZF7 708 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 PDCD7Q8N8D1 485 aaKnown RBP25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 GTF3C2Q8WUA4 911 aaPredicted RBP25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 ATP2A3Q93084 1043 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 NMRK1Q9NWW6 199 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 ARMCX1Q9P291 453 aa25.4■■□□□ 1.66
SYNGAP1-206ENST00000479510 MAP3K6O95382 1288 aa25.39■■□□□ 1.65
SYNGAP1-206ENST00000479510 TRMT5Q32P41 509 aaKnown RBP25.39■■□□□ 1.65
SYNGAP1-206ENST00000479510 CES4AQ5XG92 561 aa25.39■■□□□ 1.65
SYNGAP1-206ENST00000479510 TRIM68Q6AZZ1 485 aa25.39■■□□□ 1.65
SYNGAP1-206ENST00000479510 MAMDC4Q6UXC1 1216 aa25.39■■□□□ 1.65
SYNGAP1-206ENST00000479510 OR6B3Q8NGW1 331 aa25.39■■□□□ 1.65
SYNGAP1-206ENST00000479510 CCDC106Q9BWC9 280 aa25.39■■□□□ 1.65
SYNGAP1-206ENST00000479510 LRCH1Q9Y2L9 728 aa25.39■■□□□ 1.65
SYNGAP1-206ENST00000479510 CYB561D2O14569 222 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 KRT36O76013 467 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 TFE3P19532 575 aaPredicted RBP25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 LBRQ14739 615 aaKnown RBP25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 INSCQ1MX18 579 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 EFHC1Q5JVL4 640 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 C6orf163Q5TEZ5 329 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 SLC27A1Q6PCB7 646 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 TREML1Q86YW5 311 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 TSPAN18Q96SJ8 248 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 DCDC2Q9UHG0 476 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 ADM5C9JUS6 153 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 H3BRB1 525 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 CAPN9O14815 690 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 NPTXRO95502 500 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 SKIP12755 728 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 PGAM1P18669 254 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 AP1B1Q10567 949 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 LRRC74BQ6ZQY2 392 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 WDR75Q8IWA0 830 aaKnown RBP25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 CLMNQ96JQ2 1002 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 TUT1Q9H6E5 874 aaKnown RBP25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 DNAJB4Q9UDY4 337 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 PLA2G4CQ9UP65 541 aa25.38■■□□□ 1.65
SYNGAP1-206ENST00000479510 PPP1R12AO14974 1030 aaPredicted RBP25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 TM7SF2O76062 418 aa25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 PAX7P23759 505 aa25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 KLC1Q07866 573 aa25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 GRIK4Q16099 956 aa25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 SOWAHAQ2M3V2 549 aa25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 ZNF792Q3KQV3 632 aa25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 IRGCQ6NXR0 463 aa25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 PPFIBP2Q8ND30 876 aa25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 WDR60Q8WVS4 1066 aa25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 ZMAT2Q96NC0 199 aaKnown RBP25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 FAM167BQ9BTA0 163 aa25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 ANGPTL2Q9UKU9 493 aa25.37■■□□□ 1.65
SYNGAP1-206ENST00000479510 CCDC195A0A1B0GUA6 201 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 CIB2O75838 187 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 ENO1P06733 434 aaKnown RBP25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 AOC1P19801 751 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 GLUD2P49448 558 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 FASTKD1Q53R41 847 aaKnown RBP25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 SPDL1Q96EA4 605 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 DCAF8L1A6NGE4 600 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 H3BRJ5 948 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 PPEF2O14830 753 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 ZNF286BP0CG31 522 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 HOXD8P13378 290 aaPredicted RBP25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 GRK2P25098 689 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 HOXA11P31270 313 aaPredicted RBP25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 MATKP42679 507 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 MARCH8Q5T0T0 291 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 C9orf57Q5W0N0 161 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 MBLAC2Q68D91 279 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 ALKAL1Q6UXT8 129 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 DLK2Q6UY11 383 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 PACS1Q6VY07 963 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 DENND5BQ6ZUT9 1274 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 SCUBE1Q8IWY4 988 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 CCDC185Q8N715 623 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 RBM15BQ8NDT2 890 aaKnown RBP25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 PPP1R14CQ8TAE6 165 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 SNTG2Q9NY99 539 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 FZD10Q9ULW2 581 aa25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 UBQLN1Q9UMX0 589 aaKnown RBP25.36■■□□□ 1.65
SYNGAP1-206ENST00000479510 DICER1Q9UPY3 1922 aaKnown RBP25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 WDR27A2RRH5 827 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 TBX10O75333 385 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 GSRP00390 522 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 CD4P01730 458 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 VAV1P15498 845 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 AMPD1P23109 780 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 GRIA1P42261 906 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 SLC25A52Q3SY17 297 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 ZNF467Q7Z7K2 595 aaPredicted RBP25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 PIWIL2Q8TC59 973 aaKnown RBP25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 FAM136AQ96C01 138 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 GDAP2Q9NXN4 497 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 TUBGCP4Q9UGJ1 667 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 MYL4P12829 197 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 PNPLA4P41247 253 aa25.35■■□□□ 1.65
SYNGAP1-206ENST00000479510 COLGALT1Q8NBJ5 622 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms