RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ACAD10Q6JQN1 1059 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 FSTL4Q6MZW2 842 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 VPS36Q86VN1 386 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 SFTPA1Q8IWL2 248 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 JOSD2Q8TAC2 188 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 DDI1Q8WTU0 396 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 SYN2Q92777 582 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-215ENST00000478531 EXOC4Q96A65 974 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 MCEEQ96PE7 176 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 TBCBQ99426 244 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 NELL2Q99435 816 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 ANP32EQ9BTT0 268 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 ADAM33Q9BZ11 813 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 LMAN1LQ9HAT1 526 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 SPATA6Q9NWH7 488 aaPredicted RBP7.17□□□□□ -1.26
BRCA1-215ENST00000478531 CALCOCO1Q9P1Z2 691 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 ADAMTS1Q9UHI8 967 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 RAPGEFL1Q9UHV5 662 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 XPO7Q9UIA9 1087 aaKnown RBP7.17□□□□□ -1.26
BRCA1-215ENST00000478531 HCN4Q9Y3Q4 1203 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 LAMA1P25391 3075 aa7.17□□□□□ -1.26
BRCA1-215ENST00000478531 ZFHX2Q9C0A1 2572 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-215ENST00000478531 TRIM24O15164 1050 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 HOXC11O43248 304 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-215ENST00000478531 ACSL4O60488 711 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 TULP3O75386 442 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 IGLV3-25P01717 112 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 CHRNB1P11230 501 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 KRT3P12035 628 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 ABCB4P21439 1286 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 RRM1P23921 792 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 SDC4P31431 198 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 CCR1P32246 355 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 GGCXP38435 758 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 SGSHP51688 502 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 ZNF75DP51815 510 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 ATXN1P54253 815 aaKnown RBP7.16□□□□□ -1.26
BRCA1-215ENST00000478531 ATP11AP98196 1134 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 DEUP1Q05D60 604 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 CCINQ13939 588 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 TSR1Q2NL82 804 aaKnown RBP7.16□□□□□ -1.26
BRCA1-215ENST00000478531 C15orf59Q2T9L4 293 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-215ENST00000478531 FAM133BQ5BKY9 247 aaKnown RBP7.16□□□□□ -1.26
BRCA1-215ENST00000478531 TMEM196Q5HYL7 178 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 ADGRF1Q5T601 910 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 OTUD1Q5VV17 481 aaPredicted RBP7.16□□□□□ -1.26
BRCA1-215ENST00000478531 RAP1GAP2Q684P5 730 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 NADSYN1Q6IA69 706 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 TRNP1Q6NT89 227 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 SND1Q7KZF4 910 aaKnown RBP eCLIP7.16□□□□□ -1.26
BRCA1-215ENST00000478531 CHSY1Q86X52 802 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 MCOLN2Q8IZK6 566 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 ZNF687Q8N1G0 1237 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 C3orf20Q8ND61 904 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 ZNF653Q96CK0 615 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 P2RY11Q96G91 374 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 SLC39A13Q96H72 371 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 XPO6Q96QU8 1125 aaKnown RBP7.16□□□□□ -1.26
BRCA1-215ENST00000478531 DNAJC7Q99615 494 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 DEF6Q9H4E7 631 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 ARHGEF4Q9NR80 690 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 PIGVQ9NUD9 493 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 ABHD10Q9NUJ1 306 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 ZNHIT6Q9NWK9 470 aaKnown RBP7.16□□□□□ -1.26
BRCA1-215ENST00000478531 DLGAP2Q9P1A6 1054 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 ARHGAP20Q9P2F6 1191 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 WDR35Q9P2L0 1181 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 DEC1Q9P2X7 70 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 TMEM59LQ9UK28 342 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 BZW2Q9Y6E2 419 aaKnown RBP7.16□□□□□ -1.26
BRCA1-215ENST00000478531 DOCK4Q8N1I0 1966 aa7.16□□□□□ -1.26
BRCA1-215ENST00000478531 TYW5A2RUC4 315 aaKnown RBP7.15□□□□□ -1.26
BRCA1-215ENST00000478531 ANKRD62A6NC57 917 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-215ENST00000478531 CACNG3O60359 315 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 RNF40O75150 1001 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 KAT7O95251 611 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 LATS1O95835 1130 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 FTLP02792 175 aaPredicted RBP7.15□□□□□ -1.26
BRCA1-215ENST00000478531 APODP05090 189 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 SLC2A3P11169 496 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 PDGFRAP16234 1089 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 COL9A1P20849 921 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 DRD1P21728 446 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 SLC6A4P31645 630 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 EIF4A3P38919 411 aaKnown RBP7.15□□□□□ -1.26
BRCA1-215ENST00000478531 RPS9P46781 194 aaKnown RBP7.15□□□□□ -1.26
BRCA1-215ENST00000478531 DGKGP49619 791 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 MTAPQ13126 283 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 FZD5Q13467 585 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 SLC25A52Q3SY17 297 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 DGKKQ5KSL6 1271 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 FYB2Q5VWT5 728 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 GRAMD4Q6IC98 578 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 DCUN1D2Q6PH85 259 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 CNGA4Q8IV77 575 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 CPXM2Q8N436 756 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 ATP6V0D2Q8N8Y2 350 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 DTWD2Q8NBA8 298 aa7.15□□□□□ -1.26
BRCA1-215ENST00000478531 OR8K1Q8NGG5 319 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms