RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 KRT7P08729 469 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 COL6A2P12110 1019 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 CDH2P19022 906 aaPredicted RBP11.73□□□□□ -0.53
GFM1-207ENST00000478254 ADORA2AP29274 412 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 MIPP30301 263 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 YWHAZP63104 245 aaKnown RBP11.73□□□□□ -0.53
GFM1-207ENST00000478254 CD300CQ08708 224 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 PDAP1Q13442 181 aaKnown RBP11.73□□□□□ -0.53
GFM1-207ENST00000478254 MAPK11Q15759 364 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 SLC27A3Q5K4L6 730 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 TRAPPC3LQ5T215 181 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 UNC5AQ6ZN44 842 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 RELL1Q8IUW5 271 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 SMYD1Q8NB12 490 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 KYQ8NBH2 561 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 TMEM161BQ8NDZ6 487 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 PDZD8Q8NEN9 1154 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 FNDC8Q8TC99 324 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 DDI1Q8WTU0 396 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 FERMT1Q9BQL6 677 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 ADPGKQ9BRR6 497 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 MTMR12Q9C0I1 747 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 RAVER2Q9HCJ3 691 aaKnown RBP11.73□□□□□ -0.53
GFM1-207ENST00000478254 DDX56Q9NY93 547 aaKnown RBP11.73□□□□□ -0.53
GFM1-207ENST00000478254 COQ6Q9Y2Z9 468 aa11.73□□□□□ -0.53
GFM1-207ENST00000478254 MRPL42Q9Y6G3 142 aaKnown RBP11.73□□□□□ -0.53
GFM1-207ENST00000478254 K7ERI5 159 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 ZBTB14O43829 449 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 ATP9BO43861 1147 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 PRPSAP2O60256 369 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 CST3P01034 146 aaPredicted RBP11.72□□□□□ -0.53
GFM1-207ENST00000478254 VARSP26640 1264 aaKnown RBP11.72□□□□□ -0.53
GFM1-207ENST00000478254 MAP4P27816 1152 aaKnown RBP11.72□□□□□ -0.53
GFM1-207ENST00000478254 JAG1P78504 1218 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 PIGHQ14442 188 aaPredicted RBP11.72□□□□□ -0.53
GFM1-207ENST00000478254 KCNT2Q6UVM3 1135 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 TMEM110Q86TL2 294 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 DSELQ8IZU8 1212 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 MZB1Q8WU39 189 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 POLR3FQ9H1D9 316 aaPredicted RBP11.72□□□□□ -0.53
GFM1-207ENST00000478254 TIMMDC1Q9NPL8 285 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 TCF7L2Q9NQB0 619 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 NARFQ9UHQ1 456 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 PLCH1Q4KWH8 1693 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 PTPRJQ12913 1337 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 A0A1W2PPW3 197 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 A8MU76 341 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 RFPL1O75677 317 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 APOEP02649 317 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 GCNT1Q02742 428 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 DLG2Q15700 870 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 WDR78Q5VTH9 848 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 IL23RQ5VWK5 629 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 EGFLAMQ63HQ2 1017 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 DENND1BQ6P3S1 775 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 ZBTB49Q6ZSB9 765 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 RNF135Q8IUD6 432 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 OFCC1Q8IZS5 231 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 DCPSQ96C86 337 aaKnown RBP11.72□□□□□ -0.53
GFM1-207ENST00000478254 APOL2Q9BQE5 337 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 KLHL25Q9H0H3 589 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 TMEM216Q9P0N5 145 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 PSMD12O00232 456 aaPredicted RBP11.72□□□□□ -0.53
GFM1-207ENST00000478254 LRCH4O75427 683 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 MT-ND1P03886 318 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 HMGCRP04035 888 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 PHKA2P46019 1235 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 MS4A2Q01362 244 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 WASHC5Q12768 1159 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 DGKZQ13574 1117 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 TMEM214Q6NUQ4 689 aaKnown RBP11.72□□□□□ -0.53
GFM1-207ENST00000478254 TMEM53Q6P2H8 277 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 POTEAQ6S8J7 498 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 KYAT3Q6YP21 454 aaKnown RBP11.72□□□□□ -0.53
GFM1-207ENST00000478254 TMEM179Q6ZVK1 233 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 ADGRF2Q8IZF7 708 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 TDRD5Q8NAT2 981 aaKnown RBP11.72□□□□□ -0.53
GFM1-207ENST00000478254 SLC35B2Q8TB61 432 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 PDCD6IPQ8WUM4 868 aaKnown RBP11.72□□□□□ -0.53
GFM1-207ENST00000478254 NDEL1Q9GZM8 345 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 PLGRKTQ9HBL7 147 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 FAM49BQ9NUQ9 324 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 GTSE1Q9NYZ3 720 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 MYRFQ9Y2G1 1151 aa11.72□□□□□ -0.53
GFM1-207ENST00000478254 FARP1Q9Y4F1 1045 aaPredicted RBP11.72□□□□□ -0.53
GFM1-207ENST00000478254 SF3B1O75533 1304 aaKnown RBP eCLIP11.71□□□□□ -0.539e-7■■■■■ 57.4
GFM1-207ENST00000478254 DCCP43146 1447 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 TIPRLO75663 272 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 CPA3P15088 417 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 PDGFRAP16234 1089 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 MPSTP25325 297 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 RXRBP28702 533 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 HALP42357 657 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 CASP2P42575 452 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 GJA8P48165 433 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 GTF2BQ00403 316 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 SLC18A2Q05940 514 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 SNAPC2Q13487 334 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 GEN1Q17RS7 908 aa11.71□□□□□ -0.53
GFM1-207ENST00000478254 TEDDM1Q5T9Z0 273 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms