RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 TWIST1Q15672 202 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 NFE2Q16621 373 aaPredicted RBP5.19□□□□□ -1.58
LMBR1-216ENST00000477983 LY6KQ17RY6 165 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 ANO6Q4KMQ2 910 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 PLA1AQ53H76 456 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 C1orf141Q5JVX7 400 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 EPM2AIP1Q7L775 607 aaPredicted RBP5.19□□□□□ -1.58
LMBR1-216ENST00000477983 CAND1Q86VP6 1230 aaKnown RBP5.19□□□□□ -1.58
LMBR1-216ENST00000477983 CREBRFQ8IUR6 639 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 CNGA4Q8IV77 575 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 PRSS3P2Q8NHM4 247 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 BPIFB1Q8TDL5 484 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 ADAMTS18Q8TE60 1221 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 PIBF1Q8WXW3 757 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 RAPGEF4Q8WZA2 1011 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 FAM118BQ9BPY3 351 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 DPCDQ9BVM2 203 aaPredicted RBP5.19□□□□□ -1.58
LMBR1-216ENST00000477983 CIPCQ9C0C6 399 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 MS4A7Q9GZW8 240 aaPredicted RBP5.19□□□□□ -1.58
LMBR1-216ENST00000477983 PRDM11Q9NQV5 511 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 TRMT13Q9NUP7 481 aaKnown RBP5.19□□□□□ -1.58
LMBR1-216ENST00000477983 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.19□□□□□ -1.58
LMBR1-216ENST00000477983 SNX14Q9Y5W7 946 aa5.19□□□□□ -1.58
LMBR1-216ENST00000477983 CPDO75976 1380 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 CRYBG1Q9Y4K1 1723 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 BTBD19C9JJ37 291 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 PHGDHO43175 533 aaKnown RBP5.18□□□□□ -1.58
LMBR1-216ENST00000477983 TUSC2O75896 110 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 VNN1O95497 513 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 A1BGP04217 495 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 PRKAG1P54619 331 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 SLC13A2Q13183 592 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 FHL1Q13642 323 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 TAF7Q15545 349 aaPredicted RBP5.18□□□□□ -1.58
LMBR1-216ENST00000477983 Q4G0T1 1027 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 CCDC183Q5T5S1 534 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 BCDIN3DQ7Z5W3 292 aaKnown RBP5.18□□□□□ -1.58
LMBR1-216ENST00000477983 COL23A1Q86Y22 540 aaPredicted RBP5.18□□□□□ -1.58
LMBR1-216ENST00000477983 SFTPA1Q8IWL2 248 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 MPP5Q8N3R9 675 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 C16orf52Q8NHV5 167 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 PRR25Q96S07 402 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 SMURF2Q9HAU4 748 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 ATP6V0A4Q9HBG4 840 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 ASIC5Q9NY37 505 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 TFCP2L1Q9NZI6 479 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 ZIM2Q9NZV7 527 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 KIF3AQ9Y496 699 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 AFG3L2Q9Y4W6 797 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 COL18A1P39060 1754 aa5.18□□□□□ -1.58
LMBR1-216ENST00000477983 NCAPD2Q15021 1401 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 NHSL1Q5SYE7 1610 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 TMEM233B4DJY2 109 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 AP4M1O00189 453 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 SOCS2O14508 198 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 RNMTO43148 476 aaKnown RBP5.17□□□□□ -1.58
LMBR1-216ENST00000477983 TBC1D4O60343 1298 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 FGBP02675 491 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 PTMAP06454 111 aaKnown RBP5.17□□□□□ -1.58
LMBR1-216ENST00000477983 MYBP10242 640 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 EN2P19622 333 aaPredicted RBP5.17□□□□□ -1.58
LMBR1-216ENST00000477983 MX1P20591 662 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 FPR3P25089 353 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 PLCD1P51178 756 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 ALDH5A1P51649 535 aaPredicted RBP5.17□□□□□ -1.58
LMBR1-216ENST00000477983 UBE2HP62256 183 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 E2F1Q01094 437 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 TEFQ10587 303 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 RAB32Q13637 225 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 FAM187BQ17R55 369 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 C4orf46Q504U0 113 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 NPNTQ6UXI9 565 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 DPY19L3Q6ZPD9 716 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 TOM1L2Q6ZVM7 507 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 OVCH2Q7RTZ1 564 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 MRPL10Q7Z7H8 261 aaKnown RBP5.17□□□□□ -1.58
LMBR1-216ENST00000477983 IL31RAQ8NI17 732 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 GPT2Q8TD30 523 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 TMEM171Q8WVE6 324 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 ZSCAN31Q96LW9 406 aaPredicted RBP5.17□□□□□ -1.58
LMBR1-216ENST00000477983 FYTTD1Q96QD9 318 aaKnown RBP5.17□□□□□ -1.58
LMBR1-216ENST00000477983 B3GNT5Q9BYG0 378 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 ZSCAN32Q9NX65 697 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 KLHL13Q9P2N7 655 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 AMFRQ9UKV5 643 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 CCDC171Q6TFL3 1326 aa5.17□□□□□ -1.58
LMBR1-216ENST00000477983 LTBP4Q8N2S1 1624 aa5.16□□□□□ -1.58
LMBR1-216ENST00000477983 RGS12O14924 1447 aa5.16□□□□□ -1.58
LMBR1-216ENST00000477983 LMO7Q8WWI1 1683 aa5.16□□□□□ -1.58
LMBR1-216ENST00000477983 ROBO1Q9Y6N7 1651 aa5.16□□□□□ -1.58
LMBR1-216ENST00000477983 CAMTA1Q9Y6Y1 1673 aa5.16□□□□□ -1.58
LMBR1-216ENST00000477983 INSIG1O15503 277 aa5.16□□□□□ -1.58
LMBR1-216ENST00000477983 KCNQ3O43525 872 aa5.16□□□□□ -1.58
LMBR1-216ENST00000477983 NEMFO60524 1076 aa5.16□□□□□ -1.58
LMBR1-216ENST00000477983 FGAP02671 866 aa5.16□□□□□ -1.58
LMBR1-216ENST00000477983 SLC7A1P30825 629 aa5.16□□□□□ -1.58
LMBR1-216ENST00000477983 POLGP54098 1239 aaPredicted RBP5.16□□□□□ -1.58
LMBR1-216ENST00000477983 DMTNQ08495 405 aa5.16□□□□□ -1.58
LMBR1-216ENST00000477983 LRRC41Q15345 812 aa5.16□□□□□ -1.58
LMBR1-216ENST00000477983 HSP90AB4PQ58FF6 505 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms