RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 FAM20AQ96MK3 541 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 HSD17B14Q9BPX1 270 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 PHF20Q9BVI0 1012 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 COLEC11Q9BWP8 271 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 EPC1Q9H2F5 836 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 UBN1Q9NPG3 1134 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 PRMT8Q9NR22 394 aaPredicted RBP5.05□□□□□ -1.6
CKS1B-207ENST00000477676 C2orf42Q9NWW7 574 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 SNTG2Q9NY99 539 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 STK39Q9UEW8 545 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 FBXO4Q9UKT5 387 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 SSX2IPQ9Y2D8 614 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 TCAF1Q9Y4C2 921 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 ADAMTS9Q9P2N4 1935 aa5.05□□□□□ -1.6
CKS1B-207ENST00000477676 NPIPB8E9PQR5 432 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 I3L4J1 428 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 KRIT1O00522 736 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 ASAP2O43150 1006 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 CDC45O75419 566 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 MOSPD3O75425 235 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 TADA2AO75478 443 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 RECQL4O94761 1208 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 ERLIN2O94905 339 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 LYPLA2O95372 231 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 DEXIO95424 95 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 CTDNEP1O95476 244 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 SNRPB2P08579 225 aaKnown RBP5.04□□□□□ -1.6
CKS1B-207ENST00000477676 HNRNPA1P09651 372 aaKnown RBP eCLIP5.04□□□□□ -1.6
CKS1B-207ENST00000477676 AXLP30530 894 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 HOXA9P31269 272 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 OR1D2P34982 312 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 AKAP17AQ02040 695 aaKnown RBP5.04□□□□□ -1.6
CKS1B-207ENST00000477676 POU5F1BQ06416 359 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 SSRP1Q08945 709 aaKnown RBP5.04□□□□□ -1.6
CKS1B-207ENST00000477676 GRIK3Q13003 919 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 STK3Q13188 491 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 LSAMPQ13449 338 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 RAB33AQ14088 237 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 LPAL2Q16609 132 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 SV2CQ496J9 727 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 NCAPH2Q6IBW4 605 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 PPP4R3AQ6IN85 833 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 SLC27A1Q6PCB7 646 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 TPRG1Q6ZUI0 275 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 NOSTRINQ8IVI9 506 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 TPH2Q8IWU9 490 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 FAM26EQ8N5C1 309 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 CNNM3Q8NE01 707 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 SLC7A14Q8TBB6 771 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 PHOSPHO1Q8TCT1 267 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 PIGOQ8TEQ8 1089 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 RSPRY1Q96DX4 576 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 CHFRQ96EP1 664 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 MCRS1Q96EZ8 462 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 SHDQ96IW2 340 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 ZSWIM3Q96MP5 696 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 EIF2AK1Q9BQI3 630 aaKnown RBP5.04□□□□□ -1.6
CKS1B-207ENST00000477676 JPH2Q9BR39 696 aaPredicted RBP5.04□□□□□ -1.6
CKS1B-207ENST00000477676 TTPALQ9BTX7 342 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 NFKBIZQ9BYH8 718 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 OSBPL6Q9BZF3 934 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 CCDC113Q9H0I3 377 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 TMEM60Q9H2L4 133 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 FZD8Q9H461 694 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 PDZD7Q9H5P4 517 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 ZSWIM4Q9H7M6 989 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 POLD4Q9HCU8 107 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 HEBP1Q9NRV9 189 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.04□□□□□ -1.6
CKS1B-207ENST00000477676 ZSCAN32Q9NX65 697 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 APEX2Q9UBZ4 518 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 TESMINQ9Y4I5 508 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 PCDHB4Q9Y5E5 795 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 PCDHGA2Q9Y5H1 932 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.04□□□□□ -1.6
CKS1B-207ENST00000477676 ZFP37Q9Y6Q3 630 aaPredicted RBP5.04□□□□□ -1.6
CKS1B-207ENST00000477676 X6R8D5 127 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 TNRC6BQ9UPQ9 1833 aaKnown RBP5.04□□□□□ -1.6
CKS1B-207ENST00000477676 KALRNO60229 2985 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 ZMYM2Q9UBW7 1377 aa5.04□□□□□ -1.6
CKS1B-207ENST00000477676 SF3B1O75533 1304 aaKnown RBP eCLIP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 ARNTLO00327 626 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 TBX3O15119 743 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 MUSKO15146 869 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 TBC1D4O60343 1298 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 CCNT1O60563 726 aaKnown RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 ECI2O75521 394 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 SEC24AO95486 1093 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 VNN2O95498 520 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 RHOP08100 348 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 POU2F2P09086 479 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 FDPSP14324 419 aaKnown RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 TKTP29401 623 aaKnown RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 ECI1P42126 302 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 STAT5AP42229 794 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 BRCC3P46736 316 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 RPS9P46781 194 aaKnown RBP5.03□□□□□ -1.6
CKS1B-207ENST00000477676 RARRES1P49788 294 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 SELENOPP49908 381 aa5.03□□□□□ -1.6
CKS1B-207ENST00000477676 PPP2CBP62714 309 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms