RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 PDCD7Q8N8D1 485 aaKnown RBP10.26□□□□□ -0.77
COL4A5-204ENST00000477429 XXYLT1Q8NBI6 393 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 CYB5D2Q8WUJ1 264 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 NDRG1Q92597 394 aaKnown RBP10.26□□□□□ -0.77
COL4A5-204ENST00000477429 PRCCQ92733 491 aaPredicted RBP10.26□□□□□ -0.77
COL4A5-204ENST00000477429 CDC6Q99741 560 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 NUP58Q9BVL2 599 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 TLR8Q9NR97 1041 aaKnown RBP10.26□□□□□ -0.77
COL4A5-204ENST00000477429 KBTBD4Q9NVX7 518 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 COMMD8Q9NX08 183 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 ELOVL2Q9NXB9 296 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 KIF3AQ9Y496 699 aa10.26□□□□□ -0.77
COL4A5-204ENST00000477429 TSPAN3O60637 253 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 EPHX1P07099 455 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 KRT10P13645 584 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 CORO1AP31146 461 aaKnown RBP10.25□□□□□ -0.77
COL4A5-204ENST00000477429 ATICP31939 592 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 PLA2G4AP47712 749 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 RPS14P62263 151 aaKnown RBP10.25□□□□□ -0.77
COL4A5-204ENST00000477429 SEMG2Q02383 582 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 CAMK2GQ13555 558 aaPredicted RBP10.25□□□□□ -0.77
COL4A5-204ENST00000477429 NCOA4Q13772 614 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 STARD3Q14849 445 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 RABEP1Q15276 862 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 BMT2Q1RMZ1 405 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 NUDT18Q6ZVK8 323 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 CCDC65Q8IXS2 484 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 GALNT15Q8N3T1 639 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 FAM181AQ8N9Y4 354 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 WFDC5Q8TCV5 224 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 PARD3BQ8TEW8 1205 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 PHF12Q96QT6 1004 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 CIPCQ9C0C6 399 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 BLZF1Q9H2G9 400 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 APOBEC3GQ9HC16 384 aaKnown RBP10.25□□□□□ -0.77
COL4A5-204ENST00000477429 KIAA1586Q9HCI6 787 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 SERGEFQ9UGK8 458 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 DNMT3LQ9UJW3 386 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 NAGPAQ9UK23 515 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 LSM7Q9UK45 103 aaKnown RBP10.25□□□□□ -0.77
COL4A5-204ENST00000477429 ZFHX3Q15911 3703 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 NF1P21359 2839 aa10.25□□□□□ -0.77
COL4A5-204ENST00000477429 C10orf142B7Z368 130 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 EIF3DO15371 548 aaKnown RBP eCLIP10.24□□□□□ -0.775e-6■□□□□ 8.9
COL4A5-204ENST00000477429 PCDHGA12O60330 932 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 PHACTR2O75167 634 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 FSBPO95073 299 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 C7P10643 843 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 POU3F2P20265 443 aaPredicted RBP10.24□□□□□ -0.77
COL4A5-204ENST00000477429 HOXD9P28356 352 aaPredicted RBP10.24□□□□□ -0.77
COL4A5-204ENST00000477429 HLA-FP30511 346 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 OXTRP30559 389 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 AFF3P51826 1226 aaKnown RBP10.24□□□□□ -0.77
COL4A5-204ENST00000477429 KIF11P52732 1056 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 CLDN10P78369 228 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 CFHR1Q03591 330 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 EFEMP1Q12805 493 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 TARDBPQ13148 414 aaKnown RBP eCLIP10.24□□□□□ -0.77
COL4A5-204ENST00000477429 BIRC3Q13489 604 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 ZNF667Q5HYK9 610 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 FAM26FQ5R3K3 315 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 KLHDC10Q6PID8 442 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 IL27RAQ6UWB1 636 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 CCDC73Q6ZRK6 1079 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 BHLHA9Q7RTU4 235 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 ANKS1BQ7Z6G8 1248 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 DENND1CQ8IV53 801 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 OR2T3Q8NH03 318 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 IGSF8Q969P0 613 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 SYAP1Q96A49 352 aaPredicted RBP10.24□□□□□ -0.77
COL4A5-204ENST00000477429 MYEOVQ96EZ4 313 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 SLC6A18Q96N87 628 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 SEMA4CQ9C0C4 833 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 ZMYND15Q9H091 742 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 LHX5Q9H2C1 402 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 TMEM245Q9H330 911 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 FBXO44Q9H4M3 255 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 SLC39A2Q9NP94 309 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 PRSS16Q9NQE7 514 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 RASAL2Q9UJF2 1139 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 ATP8B3O60423 1300 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 LRBAP50851 2863 aa10.24□□□□□ -0.77
COL4A5-204ENST00000477429 USP9YO00507 2555 aaPredicted RBP10.23□□□□□ -0.77
COL4A5-204ENST00000477429 PLXNA2O75051 1894 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 A0A1B0GTQ1 180 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 TULP2O00295 520 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 SYNCRIPO60506 623 aaKnown RBP10.23□□□□□ -0.77
COL4A5-204ENST00000477429 FAM200BP0CF97 657 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 ACADMP11310 421 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 GRK6P43250 576 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 GRIA4P48058 902 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 ACADVLP49748 655 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 ASIC1P78348 528 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 KCNJ12Q14500 433 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 SLC39A14Q15043 492 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 PPP1R26Q5T8A7 1209 aaPredicted RBP10.23□□□□□ -0.77
COL4A5-204ENST00000477429 SERPINA13PQ6UXR4 307 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 ADIPOR2Q86V24 386 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 FAM217AQ8IXS0 508 aa10.23□□□□□ -0.77
COL4A5-204ENST00000477429 GRAMD1CQ8IYS0 662 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms