RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 DEF6Q9H4E7 631 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 EBF3Q9H4W6 596 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 FBRSL1Q9HCM7 1045 aaKnown RBP12.12□□□□□ -0.47
LSM2-212ENST00000477182 KRT82Q9NSB4 513 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 HESX1Q9UBX0 185 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 PCDHGC3Q9UN70 934 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 SLC6A14Q9UN76 642 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 PCDHB5Q9Y5E4 795 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 SSU72P8A0A1W2PR75 194 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 OTOL1A6NHN0 477 aaPredicted RBP12.11□□□□□ -0.47
LSM2-212ENST00000477182 DDX3XO00571 662 aaKnown RBP eCLIP12.11□□□□□ -0.473e-11■■■□□ 18
LSM2-212ENST00000477182 AKR1B10O60218 316 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 AP1G2O75843 785 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 ALDH1A2O94788 518 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 CFIP05156 583 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 FAM200BP0CF97 657 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 CYP2F1P24903 491 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 CACNA2D1P54289 1103 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 BCAT1P54687 386 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 CCZ1BP86790 482 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 CCZ1P86791 482 aaPredicted RBP12.11□□□□□ -0.47
LSM2-212ENST00000477182 GFPT1Q06210 699 aaPredicted RBP12.11□□□□□ -0.47
LSM2-212ENST00000477182 DUSP4Q13115 394 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 SLC14A1Q13336 389 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 BYSLQ13895 437 aaKnown RBP12.11□□□□□ -0.47
LSM2-212ENST00000477182 MTF1Q14872 753 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 PDGFRLQ15198 375 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 DUOXA1Q1HG43 343 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 ASTE1Q2TB18 679 aaPredicted RBP12.11□□□□□ -0.47
LSM2-212ENST00000477182 NAA35Q5VZE5 725 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 ANO7Q6IWH7 933 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 VPS36Q86VN1 386 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 TTC9BQ8N6N2 239 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 ANKRD52Q8NB46 1076 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 LSM14AQ8ND56 463 aaKnown RBP12.11□□□□□ -0.47
LSM2-212ENST00000477182 CCDC112Q8NEF3 446 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 SLC30A5Q8TAD4 765 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 CD101Q93033 1021 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 SMARCD1Q96GM5 515 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 CCDC42Q96M95 316 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 GTPBP2Q9BX10 602 aaKnown RBP12.11□□□□□ -0.47
LSM2-212ENST00000477182 KCNF1Q9H3M0 494 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 KIF9Q9HAQ2 790 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 TMEM30AQ9NV96 361 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 ADAMTS1Q9UHI8 967 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 MBD1Q9UIS9 605 aaPredicted RBP12.11□□□□□ -0.47
LSM2-212ENST00000477182 APOBEC2Q9Y235 224 aaKnown RBP12.11□□□□□ -0.47
LSM2-212ENST00000477182 GON4LQ3T8J9 2241 aa12.11□□□□□ -0.47
LSM2-212ENST00000477182 ADAMTS9Q9P2N4 1935 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 A0A087X0T9 212 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 TMCO5BA8MYB1 307 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 TULP2O00295 520 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 BEST1O76090 585 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 PRB1P04280 392 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 CYP1A1P04798 512 aaPredicted RBP12.1□□□□□ -0.47
LSM2-212ENST00000477182 FTH1P19P0C7X4 201 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 FAM228BP0C875 321 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 GJA4P35212 333 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 AVPR1AP37288 418 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 KIF11P52732 1056 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 MAP3K7CLP57077 242 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 NOMO3P69849 1222 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 PDE4CQ08493 712 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 BST2Q10589 180 aaKnown RBP12.1□□□□□ -0.47
LSM2-212ENST00000477182 SMARCB1Q12824 385 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 CLEC16AQ2KHT3 1053 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 CFAP221Q4G0U5 840 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 PKDCCQ504Y2 493 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 PEAR1Q5VY43 1037 aaPredicted RBP12.1□□□□□ -0.47
LSM2-212ENST00000477182 LYSMD4Q5XG99 296 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 TRIM68Q6AZZ1 485 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 RAD9BQ6WBX8 426 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 TRIM72Q6ZMU5 477 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 CCDC170Q8IYT3 715 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 CMTM8Q8IZV2 173 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 CPA6Q8N4T0 437 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 C1orf131Q8NDD1 294 aaKnown RBP12.1□□□□□ -0.47
LSM2-212ENST00000477182 SPPL2BQ8TCT7 592 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 C2orf15Q8WU43 125 aaKnown RBP12.1□□□□□ -0.47
LSM2-212ENST00000477182 CPA5Q8WXQ8 436 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 FUBP3Q96I24 572 aaKnown RBP eCLIP12.1□□□□□ -0.47
LSM2-212ENST00000477182 SMOQ99835 787 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 DUSP16Q9BY84 665 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 LHX5Q9H2C1 402 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 CRISPLD1Q9H336 500 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 ABCB6Q9NP58 842 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 TMEM74BQ9NUR3 256 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 SPTLC3Q9NUV7 552 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 HSFX1Q9UBD0 423 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 PILRBQ9UKJ0 227 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 SLC27A5Q9Y2P5 690 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 CEP83Q9Y592 693 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 RAI2Q9Y5P3 530 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 TENM4Q6N022 2769 aa12.1□□□□□ -0.47
LSM2-212ENST00000477182 A0A087WV48 116 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 NRDCO43847 1150 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 SOAT2O75908 522 aa12.09□□□□□ -0.47
LSM2-212ENST00000477182 LSM8O95777 96 aaKnown RBP12.09□□□□□ -0.47
LSM2-212ENST00000477182 SERPINF2P08697 491 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms