RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 P2RY11Q96G91 374 aa13.97□□□□□ -0.17
ACTN4-205ENST00000477174 PIWIL1Q96J94 861 aaKnown RBP13.97□□□□□ -0.17
ACTN4-205ENST00000477174 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.97□□□□□ -0.17
ACTN4-205ENST00000477174 RRN3Q9NYV6 651 aa13.97□□□□□ -0.17
ACTN4-205ENST00000477174 PLK2Q9NYY3 685 aa13.97□□□□□ -0.17
ACTN4-205ENST00000477174 SLC12A6Q9UHW9 1150 aa13.97□□□□□ -0.17
ACTN4-205ENST00000477174 WDR87Q6ZQQ6 2873 aa13.97□□□□□ -0.17
ACTN4-205ENST00000477174 MYO16Q9Y6X6 1858 aa13.97□□□□□ -0.17
ACTN4-205ENST00000477174 RIF1Q5UIP0 2472 aaKnown RBP13.97□□□□□ -0.17
ACTN4-205ENST00000477174 TRIM24O15164 1050 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 TIMM44O43615 452 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 LMNAP02545 664 aaKnown RBP13.96□□□□□ -0.17
ACTN4-205ENST00000477174 CHRM1P11229 460 aaPredicted RBP13.96□□□□□ -0.17
ACTN4-205ENST00000477174 FERP16591 822 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 NOS2P35228 1153 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 MATKP42679 507 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 NOMO3P69849 1222 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 FMO1Q01740 532 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 MTA1Q13330 715 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 DMC1Q14565 340 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 E2F5Q15329 346 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 C10orf76Q5T2E6 689 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 EMC10Q5UCC4 262 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 PIK3R6Q5UE93 754 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 NAA35Q5VZE5 725 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 ARCQ7LC44 396 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 TRMT11Q7Z4G4 463 aaKnown RBP13.96□□□□□ -0.17
ACTN4-205ENST00000477174 ALYREFQ86V81 257 aaKnown RBP13.96□□□□□ -0.17
ACTN4-205ENST00000477174 SFTPA1Q8IWL2 248 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 IL17RCQ8NAC3 791 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 ADAM32Q8TC27 787 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 SLC20A1Q8WUM9 679 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 BHMTQ93088 406 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 EDEM3Q9BZQ6 932 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 MMP17Q9ULZ9 603 aa13.96□□□□□ -0.17
ACTN4-205ENST00000477174 PTPRZ1P23471 2315 aaPredicted RBP13.96□□□□□ -0.18
ACTN4-205ENST00000477174 MYOFQ9NZM1 2061 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 DAB1O75553 588 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 GRAP2O75791 330 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 APBB3O95704 486 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 APOEP02649 317 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 UNGP13051 313 aaPredicted RBP13.95□□□□□ -0.18
ACTN4-205ENST00000477174 MMP8P22894 467 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 CCR1P32246 355 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 TIE1P35590 1138 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 FNTBP49356 437 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 DGKEP52429 567 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 FANCCQ00597 558 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 ARID5AQ03989 594 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 CRY1Q16526 586 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 FAM133BQ5BKY9 247 aaKnown RBP13.95□□□□□ -0.18
ACTN4-205ENST00000477174 ZC3H12AQ5D1E8 599 aaKnown RBP13.95□□□□□ -0.18
ACTN4-205ENST00000477174 EOGTQ5NDL2 527 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 IRF2BP2Q7Z5L9 587 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 WDR5BQ86VZ2 330 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 XYLT1Q86Y38 959 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 CCDC33Q8N5R6 958 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 ZNF513Q8N8E2 541 aaPredicted RBP13.95□□□□□ -0.18
ACTN4-205ENST00000477174 BAP1Q92560 729 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 NT5C3BQ969T7 300 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 BTN2A3PQ96KV6 586 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 NUP58Q9BVL2 599 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 EPC1Q9H2F5 836 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 FAM204AQ9H8W3 233 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 DDIT4Q9NX09 232 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.95□□□□□ -0.18
ACTN4-205ENST00000477174 EBF1Q9UH73 591 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 MYO15AQ9UKN7 3530 aa13.95□□□□□ -0.18
ACTN4-205ENST00000477174 PRR23AA6NEV1 266 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 KCNU1A8MYU2 1149 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 PRRT4C9JH25 899 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 NPC1O15118 1278 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 GFRA3O60609 400 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 TSPAN3O60637 253 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 KLF8O95600 359 aaPredicted RBP13.94□□□□□ -0.18
ACTN4-205ENST00000477174 F9P00740 461 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 DMDP11532 3685 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 HNRNPLP14866 589 aaKnown RBP eCLIP13.94□□□□□ -0.18
ACTN4-205ENST00000477174 ABCB4P21439 1286 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 HOXD9P28356 352 aaPredicted RBP13.94□□□□□ -0.18
ACTN4-205ENST00000477174 UBASH3AP57075 661 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 RNASE9P60153 205 aaKnown RBP13.94□□□□□ -0.18
ACTN4-205ENST00000477174 DMWDQ09019 674 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 SLC25A52Q3SY17 297 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 FIGNQ5HY92 759 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 RNF43Q68DV7 783 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 HEATR6Q6AI08 1181 aaKnown RBP13.94□□□□□ -0.18
ACTN4-205ENST00000477174 SDE2Q6IQ49 451 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 ALLCQ8N6M5 410 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 ATP6V0D2Q8N8Y2 350 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 ZNF557Q8N988 423 aaPredicted RBP13.94□□□□□ -0.18
ACTN4-205ENST00000477174 TXNDC5Q8NBS9 432 aaKnown RBP13.94□□□□□ -0.18
ACTN4-205ENST00000477174 TSTD1Q8NFU3 115 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 RNF34Q969K3 372 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 PCDHB18PQ96TA0 734 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 NPY6RQ99463 290 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 AGPAT1Q99943 283 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 POLR3BQ9NW08 1133 aaPredicted RBP13.94□□□□□ -0.18
ACTN4-205ENST00000477174 AIPL1Q9NZN9 384 aa13.94□□□□□ -0.18
ACTN4-205ENST00000477174 STAP1Q9ULZ2 295 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms