RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 ARHGEF26Q96DR7 871 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 RPH3AQ9Y2J0 694 aaPredicted RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 HBS1LQ9Y450 684 aaKnown RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 NR2E1Q9Y466 385 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 LYVE1Q9Y5Y7 322 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 CRB1P82279 1406 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 TRIM66O15016 1216 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 KIAA0391O15091 583 aaKnown RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 TRAPPC6AO75865 159 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 LYNP07948 512 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 ANXA6P08133 673 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 GIMD1P0DJR0 217 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 INSRRP14616 1297 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 CDH3P22223 829 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 RPL9P32969 192 aaKnown RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 CAP2P40123 477 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 SCNN1GP51170 649 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 MTAPQ13126 283 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 ORC2Q13416 577 aaPredicted RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 FAM83EQ2M2I3 478 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 C2orf73Q8N5S3 287 aaPredicted RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 TPD52L3Q96J77 140 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 SYT15Q9BQS2 421 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 TM6SF2Q9BZW4 377 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 UNKQ9C0B0 810 aaKnown RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 PDE11AQ9HCR9 933 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 KCNH7Q9NS40 1196 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 BARHL2Q9NY43 387 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 CDY2AQ9Y6F7 541 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 PDS5AQ29RF7 1337 aaKnown RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 C9J4A7 227 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 EXTL3O43909 919 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 SERPINA4P29622 427 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 CSTF2P33240 577 aaKnown RBP eCLIP6.86□□□□□ -1.314e-6■■■□□ 19
TTC3-215ENST00000476784 ST13P50502 369 aaKnown RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 CSTF3Q12996 717 aaKnown RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 STX3Q13277 289 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 TOB2Q14106 344 aaPredicted RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 SLC39A14Q15043 492 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 GPAT3Q53EU6 434 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 VASH1Q7L8A9 365 aaPredicted RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 PHYKPLQ8IUZ5 450 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 TDRD5Q8NAT2 981 aaKnown RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 ST13P5Q8NFI4 369 aaPredicted RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 PCDHGA6Q9Y5G7 932 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 PTPRJQ12913 1337 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 DAB1O75553 588 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 TOP3BO95985 862 aaKnown RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 KRT16P08779 473 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 CCR1P32246 355 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 CLK1P49759 484 aaKnown RBP6.86□□□□□ -1.31
TTC3-215ENST00000476784 SNCBQ16143 134 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 FGD3Q5JSP0 725 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 ARMC12Q5T9G4 340 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 SLFN11Q7Z7L1 901 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 OR5T3Q8NGG3 340 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 USP6NLQ92738 828 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 IL17RAQ96F46 866 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 TIPINQ9BVW5 301 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 SLITRK2Q9H156 845 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 SLC32A1Q9H598 525 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 ZNF232Q9UNY5 417 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 GAKO14976 1311 aa6.86□□□□□ -1.31
TTC3-215ENST00000476784 NFIBO00712 420 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 HNRNPRO43390 633 aaKnown RBP6.85□□□□□ -1.31
TTC3-215ENST00000476784 LAMTOR5O43504 91 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 GUCY1B2O75343 617 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 HMGCRP04035 888 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 ENO1P06733 434 aaKnown RBP6.85□□□□□ -1.31
TTC3-215ENST00000476784 NFKB1P19838 968 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 MSX1P28360 303 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 GPM6BQ13491 265 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 MOB2Q70IA6 237 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 Q8N9G6 341 aaPredicted RBP6.85□□□□□ -1.31
TTC3-215ENST00000476784 TBC1D10AQ9BXI6 508 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 RAD21L1Q9H4I0 556 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 SCN3BQ9NY72 215 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 MTMR4Q9NYA4 1195 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 CARNS1A5YM72 827 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 FAM25AB3EWG3 89 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 FAM25CB3EWG5 89 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 FAM25GB3EWG6 89 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 ZBTB14O43829 449 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 SPRP35270 261 aaPredicted RBP6.85□□□□□ -1.31
TTC3-215ENST00000476784 MLH1P40692 756 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 SNRPD1P62314 119 aaKnown RBP6.85□□□□□ -1.31
TTC3-215ENST00000476784 FPGSQ05932 587 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 PIGHQ14442 188 aaPredicted RBP6.85□□□□□ -1.31
TTC3-215ENST00000476784 ZC2HC1CQ53FD0 456 aaPredicted RBP6.85□□□□□ -1.31
TTC3-215ENST00000476784 PCYOX1LQ8NBM8 494 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 SSH3Q8TE77 659 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 SNF8Q96H20 258 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 MTMR9Q96QG7 549 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 ZMYM5Q9UJ78 669 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 PZPP20742 1482 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 PEG3Q9GZU2 1588 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 SF3B1O75533 1304 aaKnown RBP eCLIP6.85□□□□□ -1.31
TTC3-215ENST00000476784 SPATA31A1Q5TZJ5 1347 aa6.85□□□□□ -1.31
TTC3-215ENST00000476784 PER2O15055 1255 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms