RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 GABRB2P47870 512 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 SNX16P57768 344 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 SIM2Q14190 667 aaPredicted RBP14.28□□□□□ -0.12
MSL3-213ENST00000476743 TAF5Q15542 800 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 FAM133BQ5BKY9 247 aaKnown RBP14.28□□□□□ -0.12
MSL3-213ENST00000476743 EFHC1Q5JVL4 640 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 MPP7Q5T2T1 576 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 EGFLAMQ63HQ2 1017 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 NADSYN1Q6IA69 706 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 FAM183BPQ6ZVS7 135 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 SLC26A9Q7LBE3 791 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 NOP9Q86U38 636 aaKnown RBP14.28□□□□□ -0.12
MSL3-213ENST00000476743 ZNF677Q86XU0 584 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 ZDHHC17Q8IUH5 632 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 DHX40Q8IX18 779 aaKnown RBP14.28□□□□□ -0.12
MSL3-213ENST00000476743 TMEM35BQ8NCS4 154 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 ZNF397Q8NF99 534 aaPredicted RBP14.28□□□□□ -0.12
MSL3-213ENST00000476743 BHMTQ93088 406 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 GABRG3Q99928 467 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 CD248Q9HCU0 757 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 NOCTQ9UK39 431 aaKnown RBP14.28□□□□□ -0.12
MSL3-213ENST00000476743 CLEC4EQ9ULY5 219 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 CEP83Q9Y592 693 aa14.28□□□□□ -0.12
MSL3-213ENST00000476743 CAPN9O14815 690 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 RPP40O75818 363 aaKnown RBP14.27□□□□□ -0.13
MSL3-213ENST00000476743 LSM8O95777 96 aaKnown RBP14.27□□□□□ -0.13
MSL3-213ENST00000476743 TRUB2O95900 331 aaKnown RBP14.27□□□□□ -0.13
MSL3-213ENST00000476743 ATP1A3P13637 1013 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 NTSR1P30989 418 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 SLC6A4P31645 630 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 SCNN1AP37088 669 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 SLC11A2P49281 568 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 POLR2FP61218 127 aaKnown RBP14.27□□□□□ -0.13
MSL3-213ENST00000476743 SLC6A3Q01959 620 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 ENPP2Q13822 863 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 SYCP1Q15431 976 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 GEN1Q17RS7 908 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 PIK3R6Q5UE93 754 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 KIAA0907Q7Z7F0 614 aaPredicted RBP14.27□□□□□ -0.13
MSL3-213ENST00000476743 DCLK2Q8N568 766 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.27□□□□□ -0.13
MSL3-213ENST00000476743 MDGA1Q8NFP4 955 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 OLIG1Q8TAK6 271 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 IPO4Q8TEX9 1081 aaKnown RBP14.27□□□□□ -0.13
MSL3-213ENST00000476743 DDI1Q8WTU0 396 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 ZC3H10Q96K80 434 aaKnown RBP14.27□□□□□ -0.13
MSL3-213ENST00000476743 POLMQ9NP87 494 aaPredicted RBP14.27□□□□□ -0.13
MSL3-213ENST00000476743 FAM207AQ9NSI2 230 aaPredicted RBP14.27□□□□□ -0.13
MSL3-213ENST00000476743 RAB23Q9ULC3 237 aa14.27□□□□□ -0.13
MSL3-213ENST00000476743 MUC22E2RYF6 1773 aaPredicted RBP14.27□□□□□ -0.13
MSL3-213ENST00000476743 A0A1W2PQF6 199 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 SMTNL1A8MU46 457 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 NPC1O15118 1278 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 DAB1O75553 588 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 ALDH1A2O94788 518 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 RETP07949 1114 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 CDK11BP21127 795 aaKnown RBP14.26□□□□□ -0.13
MSL3-213ENST00000476743 TGM1P22735 817 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 SOX5P35711 763 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 SGSHP51688 502 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 NOMO3P69849 1222 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 PITX1P78337 314 aaPredicted RBP14.26□□□□□ -0.13
MSL3-213ENST00000476743 UBXN1Q04323 297 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 IQCB1Q15051 598 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 EIF4HQ15056 248 aaKnown RBP14.26□□□□□ -0.13
MSL3-213ENST00000476743 ANO7Q6IWH7 933 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 PRR23BQ6ZRT6 265 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 CACNA2D4Q7Z3S7 1137 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 ANKS1BQ7Z6G8 1248 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 DEFB106AQ8N104 65 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 GPR161Q8N6U8 529 aaKnown RBP14.26□□□□□ -0.13
MSL3-213ENST00000476743 ADAM32Q8TC27 787 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 TMA16Q96EY4 203 aaKnown RBP14.26□□□□□ -0.13
MSL3-213ENST00000476743 LOXL4Q96JB6 756 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 PRICKLE1Q96MT3 831 aaPredicted RBP14.26□□□□□ -0.13
MSL3-213ENST00000476743 ACOX2Q99424 681 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 ZDHHC4Q9NPG8 344 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 NCDNQ9UBB6 729 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 GMEB2Q9UKD1 530 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 SPTBN4Q9H254 2564 aa14.26□□□□□ -0.13
MSL3-213ENST00000476743 CKAP5Q14008 2032 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 GOLGA6L7A0A1B0GV03 622 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 KCNU1A8MYU2 1149 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 TSPAN3O60637 253 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 LRP3O75074 770 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 GFPT2O94808 682 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 CYP1A1P04798 512 aaPredicted RBP14.25□□□□□ -0.13
MSL3-213ENST00000476743 MMEP08473 750 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 HOXB2P14652 356 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 STAT1P42224 750 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 ZNF165P49910 485 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 CDK17Q00537 523 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 CDR2Q01850 454 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 DCAF6Q58WW2 860 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 TMEM215Q68D42 235 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 OR6B2Q6IFH4 312 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 RFWD3Q6PCD5 774 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 CEP68Q76N32 757 aa14.25□□□□□ -0.13
MSL3-213ENST00000476743 FAM160A2Q8N612 972 aaPredicted RBP14.25□□□□□ -0.13
MSL3-213ENST00000476743 NEK11Q8NG66 645 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms