RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 NDUFB5O43674 189 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 UGT1A9O60656 530 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 ADAM23O75077 832 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 CIB2O75838 187 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 IL1BP01584 269 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 WEE2P0C1S8 567 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 CCND2P30279 289 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 NAMPTP43490 491 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 CXCL9Q07325 125 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 PPIDQ08752 370 aaKnown RBP8.65□□□□□ -1.02
VAPB-205ENST00000476395 MMRN1Q13201 1228 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 CYLC2Q14093 348 aaPredicted RBP8.65□□□□□ -1.02
VAPB-205ENST00000476395 HIF1AQ16665 826 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 LIN9Q5TKA1 542 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 C3orf62Q6ZUJ4 267 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 DENND5BQ6ZUT9 1274 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 NET1Q7Z628 596 aaPredicted RBP8.65□□□□□ -1.02
VAPB-205ENST00000476395 C14orf80Q86SX3 495 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 HPS6Q86YV9 775 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 BRSK2Q8IWQ3 736 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 EMC1Q8N766 993 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 CMASQ8NFW8 434 aaPredicted RBP8.65□□□□□ -1.02
VAPB-205ENST00000476395 FNDC8Q8TC99 324 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 UGT1A7Q9HAW7 530 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 UGT1A10Q9HAW8 530 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 UGT1A8Q9HAW9 530 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 TMOD2Q9NZR1 351 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 CPSF3Q9UKF6 684 aaKnown RBP8.65□□□□□ -1.02
VAPB-205ENST00000476395 POLIQ9UNA4 740 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 SMIM31A0A1B0GVY4 71 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 GABBR2O75899 941 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 LSM8O95777 96 aaKnown RBP8.65□□□□□ -1.02
VAPB-205ENST00000476395 IFNB1P01574 187 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 PRKCGP05129 697 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 PSAPP07602 524 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 RAP1GAPP47736 663 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 KPNA1P52294 538 aaPredicted RBP8.65□□□□□ -1.02
VAPB-205ENST00000476395 DYNLT1P63172 113 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 PHEXP78562 749 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 ORC1Q13415 861 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 ANKRD20A4Q4UJ75 823 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 TMEM259Q4ZIN3 620 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 WDR44Q5JSH3 913 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 RABGAP1LQ5R372 815 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 SH2D4BQ5SQS7 431 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 C6orf52Q5T4I8 152 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 FAM91A1Q658Y4 838 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 XRRA1Q6P2D8 792 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 CHSY1Q86X52 802 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 RHPN2Q8IUC4 686 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 PPIL6Q8IXY8 311 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 RTKN2Q8IZC4 609 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 ZNF398Q8TD17 642 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 ZNF778Q96MU6 729 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 MSTO1Q9BUK6 570 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 IL1RAPL1Q9NZN1 696 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 SENP1Q9P0U3 644 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 CIDEBQ9UHD4 219 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 STRIP2Q9ULQ0 834 aa8.65□□□□□ -1.02
VAPB-205ENST00000476395 LSM1O15116 133 aaKnown RBP8.65□□□□□ -1.03
VAPB-205ENST00000476395 CST8O60676 142 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 NFKBIAP25963 317 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 HALP42357 657 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 MTTPP55157 894 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 IRX4P78413 519 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 FAAP100Q0VG06 881 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 PTK7Q13308 1070 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 TUBB3Q13509 450 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 LPIN1Q14693 890 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 C16orf72Q14CZ0 275 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 TRMT5Q32P41 509 aaKnown RBP8.65□□□□□ -1.03
VAPB-205ENST00000476395 C6orf183Q5T699 404 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 PPP1R2P3Q6NXS1 205 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 CAND1Q86VP6 1230 aaKnown RBP8.65□□□□□ -1.03
VAPB-205ENST00000476395 GABPB2Q8TAK5 448 aaPredicted RBP8.65□□□□□ -1.03
VAPB-205ENST00000476395 DIS3LQ8TF46 1054 aaKnown RBP8.65□□□□□ -1.03
VAPB-205ENST00000476395 LRRN4Q8WUT4 740 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 SLC44A1Q8WWI5 657 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 UPF1Q92900 1129 aaKnown RBP eCLIP8.65□□□□□ -1.033e-10■■■■■ 36.6
VAPB-205ENST00000476395 ATP6V0A1Q93050 837 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 VPS11Q9H270 941 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 MYOZ2Q9NPC6 264 aa8.65□□□□□ -1.03
VAPB-205ENST00000476395 BRCA2P51587 3418 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 TMEM247A6NEH6 219 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 SGK1O00141 431 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 MAGEC1O60732 1142 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 TRMUO75648 421 aaKnown RBP8.64□□□□□ -1.03
VAPB-205ENST00000476395 RFPL1O75677 317 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 RBP3P10745 1247 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 TBXAS1P24557 533 aaPredicted RBP8.64□□□□□ -1.03
VAPB-205ENST00000476395 ARRB2P32121 409 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 CPOXP36551 454 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 ELK3P41970 407 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 LMNB2Q03252 620 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 NSUN2Q08J23 767 aaKnown RBP eCLIP8.64□□□□□ -1.03
VAPB-205ENST00000476395 XKR3Q5GH77 459 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 ELMSAN1Q6PJG2 1045 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 CENPUQ71F23 418 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 SLC7A5P1Q8MH63 180 aa8.64□□□□□ -1.03
VAPB-205ENST00000476395 BCO2Q9BYV7 579 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms