RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 CDKAL1Q5VV42 579 aa16.9■□□□□ 0.3
COL1A1-205ENST00000476387 DENND1BQ6P3S1 775 aa16.9■□□□□ 0.3
COL1A1-205ENST00000476387 TOGARAM2Q6ZUX3 1019 aa16.9■□□□□ 0.3
COL1A1-205ENST00000476387 FMNL3Q8IVF7 1028 aa16.9■□□□□ 0.3
COL1A1-205ENST00000476387 CHPFQ8IZ52 775 aa16.9■□□□□ 0.3
COL1A1-205ENST00000476387 ANKRD20A12PQ8NF67 263 aa16.9■□□□□ 0.3
COL1A1-205ENST00000476387 GABRG3Q99928 467 aa16.9■□□□□ 0.3
COL1A1-205ENST00000476387 MIS12Q9H081 205 aa16.9■□□□□ 0.3
COL1A1-205ENST00000476387 CD248Q9HCU0 757 aa16.9■□□□□ 0.3
COL1A1-205ENST00000476387 SIX2Q9NPC8 291 aa16.9■□□□□ 0.3
COL1A1-205ENST00000476387 EVLQ9UI08 416 aaPredicted RBP16.9■□□□□ 0.3
COL1A1-205ENST00000476387 MBD1Q9UIS9 605 aaPredicted RBP16.9■□□□□ 0.3
COL1A1-205ENST00000476387 SLC27A6Q9Y2P4 619 aa16.9■□□□□ 0.3
COL1A1-205ENST00000476387 PRRT4C9JH25 899 aa16.89■□□□□ 0.29
COL1A1-205ENST00000476387 NPC1O15118 1278 aa16.89■□□□□ 0.29
COL1A1-205ENST00000476387 HOXD12P35452 270 aa16.89■□□□□ 0.29
COL1A1-205ENST00000476387 GPD2P43304 727 aa16.89■□□□□ 0.29
COL1A1-205ENST00000476387 SLC36A4Q6YBV0 504 aa16.89■□□□□ 0.29
COL1A1-205ENST00000476387 CLEC4CQ8WTT0 213 aa16.89■□□□□ 0.29
COL1A1-205ENST00000476387 PIGKQ92643 395 aa16.89■□□□□ 0.29
COL1A1-205ENST00000476387 FAM149B1Q96BN6 582 aa16.89■□□□□ 0.29
COL1A1-205ENST00000476387 ACP6Q9NPH0 428 aa16.89■□□□□ 0.29
COL1A1-205ENST00000476387 AJAP1Q9UKB5 411 aaPredicted RBP16.89■□□□□ 0.29
COL1A1-205ENST00000476387 AGO1Q9UL18 857 aaKnown RBP16.89■□□□□ 0.29
COL1A1-205ENST00000476387 HBS1LQ9Y450 684 aaKnown RBP16.89■□□□□ 0.29
COL1A1-205ENST00000476387 CACNA1BQ00975 2339 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 AP5Z1O43299 807 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 ZNF217O75362 1048 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 CYBBP04839 570 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 HARS2P49590 506 aaKnown RBP16.88■□□□□ 0.29
COL1A1-205ENST00000476387 TYRO3Q06418 890 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 KRT31Q15323 416 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 E2F5Q15329 346 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 FKBP15Q5T1M5 1219 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 DAB2IPQ5VWQ8 1189 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 FYB2Q5VWT5 728 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 LYSMD4Q5XG99 296 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 MSANTD2Q6P1R3 559 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 SYT12Q8IV01 421 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 DENND1CQ8IV53 801 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 FAM217AQ8IXS0 508 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 TMEFF1Q8IYR6 380 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 CPXM2Q8N436 756 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 FRMD1Q8N878 549 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 IPO4Q8TEX9 1081 aaKnown RBP16.88■□□□□ 0.29
COL1A1-205ENST00000476387 STK32AQ8WU08 396 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 BHMTQ93088 406 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 CNTNAP3BQ96NU0 1288 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 NOX5Q96PH1 765 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 ACOX2Q99424 681 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 TRIM62Q9BVG3 475 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 CNTNAP3Q9BZ76 1288 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 VPS16Q9H269 839 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 FANCLQ9NW38 375 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 PLK2Q9NYY3 685 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 TMEM63CQ9P1W3 806 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 CALCOCO1Q9P1Z2 691 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 SFMBT1Q9UHJ3 866 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 CEP83Q9Y592 693 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 FHOD1Q9Y613 1164 aa16.88■□□□□ 0.29
COL1A1-205ENST00000476387 C4orf47A7E2U8 309 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 GABBR2O75899 941 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 KCNA4P22459 653 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 WASP42768 502 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 PTGER3P43115 390 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 BPIFB4P59827 614 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 KCNMA1Q12791 1236 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 LMAN2Q12907 356 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 PDCLQ13371 301 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 TRIP4Q15650 581 aaPredicted RBP16.87■□□□□ 0.29
COL1A1-205ENST00000476387 KLHDC7AQ5VTJ3 777 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 PEAR1Q5VY43 1037 aaPredicted RBP16.87■□□□□ 0.29
COL1A1-205ENST00000476387 KIAA1211LQ6NV74 962 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 CAVIN1Q6NZI2 390 aaKnown RBP16.87■□□□□ 0.29
COL1A1-205ENST00000476387 PASD1Q8IV76 773 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 P2RY11Q96G91 374 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 SLC4A5Q9BY07 1137 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 NAT10Q9H0A0 1025 aaKnown RBP16.87■□□□□ 0.29
COL1A1-205ENST00000476387 TMEM9BQ9NQ34 198 aa16.87■□□□□ 0.29
COL1A1-205ENST00000476387 PATE3B3GLJ2 98 aa16.86■□□□□ 0.29
COL1A1-205ENST00000476387 E5RJQ4 531 aa16.86■□□□□ 0.29
COL1A1-205ENST00000476387 FOXN3O00409 490 aaPredicted RBP16.86■□□□□ 0.29
COL1A1-205ENST00000476387 MSI1O43347 362 aaKnown RBP16.86■□□□□ 0.29
COL1A1-205ENST00000476387 KCNK5O95279 499 aa16.86■□□□□ 0.29
COL1A1-205ENST00000476387 PNMA6AP0CW24 399 aaPredicted RBP16.86■□□□□ 0.29
COL1A1-205ENST00000476387 NCAM1P13591 858 aa16.86■□□□□ 0.29
COL1A1-205ENST00000476387 NDUFV2P19404 249 aa16.86■□□□□ 0.29
COL1A1-205ENST00000476387 KRT9P35527 623 aa16.86■□□□□ 0.29
COL1A1-205ENST00000476387 PI4KAP42356 2102 aa16.86■□□□□ 0.29
COL1A1-205ENST00000476387 RPL34P49207 117 aaKnown RBP16.86■□□□□ 0.29
COL1A1-205ENST00000476387 IRX4P78413 519 aa16.86■□□□□ 0.29
COL1A1-205ENST00000476387 DRAP1Q14919 205 aaPredicted RBP16.86■□□□□ 0.29
COL1A1-205ENST00000476387 TRIM61Q5EBN2 209 aa16.86■□□□□ 0.29
COL1A1-205ENST00000476387 N4BP2L1Q5TBK1 243 aaPredicted RBP16.86■□□□□ 0.29
COL1A1-205ENST00000476387 SCUBE3Q8IX30 993 aa16.86■□□□□ 0.29
COL1A1-205ENST00000476387 FAM71AQ8IYT1 594 aa16.86■□□□□ 0.29
COL1A1-205ENST00000476387 UCMAQ8WVF2 138 aa16.86■□□□□ 0.29
COL1A1-205ENST00000476387 PIWIL1Q96J94 861 aaKnown RBP16.86■□□□□ 0.29
COL1A1-205ENST00000476387 SLC2A11Q9BYW1 496 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms