RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 WNT3P56703 355 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 LOXL3P58215 753 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 STK3Q13188 491 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 GBX1Q14549 363 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 PTPRRQ15256 657 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 GPR162Q16538 588 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 CD300EQ496F6 205 aaPredicted RBP5.92□□□□□ -1.46
SSR3-206ENST00000476217 SLC44A4Q53GD3 710 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 C12orf60Q5U649 245 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 VWA1Q6PCB0 445 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 PCSK4Q6UW60 755 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 LAYNQ6UX15 382 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 ZNF783Q6ZMS7 281 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 CYB5R4Q7L1T6 521 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 CCDC83Q8IWF9 413 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 KIAA0319LQ8IZA0 1049 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 B3GALNT2Q8NCR0 500 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 OR6B3Q8NGW1 331 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 ALG8Q9BVK2 526 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 B3GNT5Q9BYG0 378 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 OSBPL5Q9H0X9 879 aaPredicted RBP5.92□□□□□ -1.46
SSR3-206ENST00000476217 ALDH8A1Q9H2A2 487 aaPredicted RBP5.92□□□□□ -1.46
SSR3-206ENST00000476217 TDRD3Q9H7E2 651 aaKnown RBP5.92□□□□□ -1.46
SSR3-206ENST00000476217 L1RE1Q9UN81 338 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 PCDHAC2Q9Y5I4 1007 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 ZNF541Q9H0D2 1346 aa5.92□□□□□ -1.46
SSR3-206ENST00000476217 KLF18A0A0U1RQI7 1052 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 CLRN2A0PK11 232 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 CCDC69A6NI79 296 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 SMIM22K7EJ46 135 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 SH2B2O14492 632 aaPredicted RBP5.91□□□□□ -1.46
SSR3-206ENST00000476217 YY2O15391 372 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 KIF20AO95235 890 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 LARGE1O95461 756 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 HDCP19113 662 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 MPLP40238 635 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 GMPSP49915 693 aaPredicted RBP5.91□□□□□ -1.46
SSR3-206ENST00000476217 PLCD1P51178 756 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 PRELPP51888 382 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 MRPS35P82673 323 aaKnown RBP5.91□□□□□ -1.46
SSR3-206ENST00000476217 TCP10Q12799 353 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 CUL4AQ13619 759 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 WTAPQ15007 396 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 IQCB1Q15051 598 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 ME3Q16798 604 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 LONRF3Q496Y0 759 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 TEDDM1Q5T9Z0 273 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 LMBRD2Q68DH5 695 aaPredicted RBP5.91□□□□□ -1.46
SSR3-206ENST00000476217 KIAA0895LQ68EN5 471 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 SYNE3Q6ZMZ3 975 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 CHST15Q7LFX5 561 aaPredicted RBP5.91□□□□□ -1.46
SSR3-206ENST00000476217 IQCA1Q86XH1 822 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 ZNF444Q8N0Y2 327 aaPredicted RBP5.91□□□□□ -1.46
SSR3-206ENST00000476217 SLC44A3Q8N4M1 653 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 NECAB1Q8N987 351 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 SLC44A5Q8NCS7 719 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 NSUN7Q8NE18 718 aaKnown RBP5.91□□□□□ -1.46
SSR3-206ENST00000476217 FAM46DQ8NEK8 389 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 PPP1R35Q8TAP8 253 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 CAGE1Q8TC20 777 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 DYNLL2Q96FJ2 89 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 PRMT6Q96LA8 375 aaPredicted RBP5.91□□□□□ -1.46
SSR3-206ENST00000476217 MRGPRX1Q96LB2 322 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 SPATA5L1Q9BVQ7 753 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 VEZTQ9HBM0 779 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 MYOZ2Q9NPC6 264 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 DDX4Q9NQI0 724 aaKnown RBP5.91□□□□□ -1.46
SSR3-206ENST00000476217 HESX1Q9UBX0 185 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 TPCN1Q9ULQ1 816 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 AGAP1Q9UPQ3 857 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 SHOC2Q9UQ13 582 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 SMC3Q9UQE7 1217 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.91□□□□□ -1.46
SSR3-206ENST00000476217 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.91□□□□□ -1.46
SSR3-206ENST00000476217 MYH8P13535 1937 aa5.91□□□□□ -1.46
SSR3-206ENST00000476217 COL2A1P02458 1487 aaPredicted RBP5.9□□□□□ -1.46
SSR3-206ENST00000476217 SBF1O95248 1867 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 ISM1B1AKI9 464 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 TCP10L2B9ZVM9 353 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 PRPF3O43395 683 aaKnown RBP5.9□□□□□ -1.46
SSR3-206ENST00000476217 DHX16O60231 1041 aaKnown RBP5.9□□□□□ -1.46
SSR3-206ENST00000476217 ENTPD3O75355 529 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 DNAJB5O75953 348 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 UNC5CO95185 931 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 ZBED1O96006 694 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 LMNAP02545 664 aaKnown RBP5.9□□□□□ -1.46
SSR3-206ENST00000476217 GRPP07492 148 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 TSPY3P0CV98 308 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 TSPY8P0CW00 308 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 RPL17P18621 184 aaKnown RBP5.9□□□□□ -1.46
SSR3-206ENST00000476217 GATA3P23771 443 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 GCLCP48506 637 aaPredicted RBP5.9□□□□□ -1.46
SSR3-206ENST00000476217 NT5C2P49902 561 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 MMP14P50281 582 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 INHBEP58166 350 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 FAM193AP78312 1265 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 RAB32Q13637 225 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 HLTFQ14527 1009 aaKnown RBP eCLIP5.9□□□□□ -1.46
SSR3-206ENST00000476217 PPP4R4Q6NUP7 873 aa5.9□□□□□ -1.46
SSR3-206ENST00000476217 TAF2Q6P1X5 1199 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms