RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 PQLC3Q8N755 202 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 MRPL43Q8N983 215 aaKnown RBP6.87□□□□□ -1.31
ATG4A-207ENST00000474825 KCTD6Q8NC69 237 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 PDZD8Q8NEN9 1154 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 ATL2Q8NHH9 583 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 PCDH19Q8TAB3 1148 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 MAGOHBQ96A72 148 aaKnown RBP6.87□□□□□ -1.31
ATG4A-207ENST00000474825 C1orf74Q96LT6 269 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 KLHL5Q96PQ7 755 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 HAPLN3Q96S86 360 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 HEMGNQ9BXL5 484 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 SLC6A16Q9GZN6 736 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 EPC1Q9H2F5 836 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 ZWILCHQ9H900 591 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 ANLNQ9NQW6 1124 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 OLA1Q9NTK5 396 aaKnown RBP6.87□□□□□ -1.31
ATG4A-207ENST00000474825 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.87□□□□□ -1.31
ATG4A-207ENST00000474825 STIM2Q9P246 746 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 AMACRQ9UHK6 382 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 FEZ2Q9UHY8 353 aaPredicted RBP6.87□□□□□ -1.31
ATG4A-207ENST00000474825 AP4E1Q9UPM8 1137 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 R3HDM2Q9Y2K5 976 aaKnown RBP6.87□□□□□ -1.31
ATG4A-207ENST00000474825 SLC27A5Q9Y2P5 690 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 YIPF1Q9Y548 306 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 ASB3Q9Y575 518 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 PCDHA11Q9Y5I1 949 aa6.87□□□□□ -1.31
ATG4A-207ENST00000474825 PLXNA3P51805 1871 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 ZNF840PA6NDX5 716 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 C2orf71A6NGG8 1288 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 APOC4-APOC2K7ER74 178 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 SOX1O00570 391 aaPredicted RBP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 CAPN9O14815 690 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 CST8O60676 142 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 SOAT2O75908 522 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 ARHGEF15O94989 841 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 CXCL14O95715 111 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 APOC2P02655 101 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 ITGAVP06756 1048 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 POU2F2P09086 479 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 RHOXF2BP0C7M4 288 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 ZFXP17010 805 aaPredicted RBP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 TGM2P21980 687 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 DNAJB1P25685 340 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 DNAJB2P25686 324 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 IVDP26440 423 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 ECHS1P30084 290 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 GBP1P32455 592 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 SSR1P43307 286 aaKnown RBP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 NR2C2P49116 596 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 VCPP55072 806 aaKnown RBP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 ARPP19P56211 112 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 ERVFC1P60507 584 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 VSNL1P62760 191 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 DR1Q01658 176 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 FOXC1Q12948 553 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 TAF10Q12962 218 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 XRCC4Q13426 336 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 CAMK1Q14012 370 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 DPYSQ14117 519 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 SMC1AQ14683 1233 aaKnown RBP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 NOMO1Q15155 1222 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 ANKRD20A8PQ5CZ79 823 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 C9orf50Q5SZB4 431 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 LCE2CQ5TA81 110 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 MANEALQ5VSG8 457 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 SDHAF4Q5VUM1 108 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 PDE12Q6L8Q7 609 aaKnown RBP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 SCYL2Q6P3W7 929 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 CCDC137Q6PK04 289 aaKnown RBP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 FAM131BQ86XD5 332 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 JAMLQ86YT9 394 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 CCDC50Q8IVM0 306 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 KLHL7Q8IXQ5 586 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 IFT20Q8IY31 132 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 PLD5Q8N7P1 536 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 SLC7A14Q8TBB6 771 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 HSPH1Q92598 858 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 EDEM1Q92611 657 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 CASP10Q92851 521 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 FBXO32Q969P5 355 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 PSMG2Q969U7 264 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 ACSF2Q96CM8 615 aaPredicted RBP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 RTP4Q96DX8 246 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 SERPINB11Q96P15 392 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 CSPG4P5Q96PW8 444 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 KCTD15Q96SI1 283 aaPredicted RBP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 CDK5RAP1Q96SZ6 601 aaKnown RBP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 RHOXF2Q9BQY4 288 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 ERP44Q9BS26 406 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 LRRC3Q9BY71 257 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 FAM129AQ9BZQ8 928 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 WDCPQ9H6R7 721 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 TLR8Q9NR97 1041 aaKnown RBP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 KLHL11Q9NVR0 708 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 DDIT4Q9NX09 232 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 CWC15Q9P013 229 aaKnown RBP6.86□□□□□ -1.31
ATG4A-207ENST00000474825 GMIPQ9P107 970 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 NEU3Q9UQ49 428 aa6.86□□□□□ -1.31
ATG4A-207ENST00000474825 TLR6Q9Y2C9 796 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms