RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CD63P08962 238 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 CYP2A6P11509 494 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 YY1P25490 414 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 GALNSP34059 522 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 SERPINF1P36955 418 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 RAE1P78406 368 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 FHL3Q13643 280 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 ZNF268Q14587 947 aaPredicted RBP3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 FAM110CQ1W6H9 321 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 ZNF569Q5MCW4 686 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 TANGO2Q6ICL3 276 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 MSANTD2Q6P1R3 559 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 WDR93Q6P2C0 686 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 NFRKBQ6P4R8 1299 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 KLHL17Q6TDP4 642 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 UEVLDQ8IX04 471 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 C8orf58Q8NAV2 365 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 SRFBP1Q8NEF9 429 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 BCAS4Q8TDM0 211 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 CPT1BQ92523 772 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 AKAP1Q92667 903 aaKnown RBP eCLIP3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 CUL5Q93034 780 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 KAZALD1Q96I82 304 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 RTKNQ9BST9 563 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 NUAK2Q9H093 628 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 CDCP1Q9H5V8 836 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 AGO4Q9HCK5 861 aaKnown RBP3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 OBP2BQ9NPH6 170 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 DACT1Q9NYF0 836 aa3.76□□□□□ -1.81
ECHDC1-213ENST00000474240 ZNF335Q9H4Z2 1342 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 CCDC187A0A096LP49 1063 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 WIPF3A6NGB9 483 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 MBD3L5A6NJ08 208 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 LGALS16A8MUM7 142 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 FYB1O15117 783 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 NKX2-8O15522 239 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 PRAMEF2O60811 474 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 PEX14O75381 377 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 TAF5LO75529 589 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 EIF3JO75822 258 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 ALDOAP04075 364 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 PDIA3P30101 505 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 SLC12A2P55011 1212 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 GRAMD1BQ3KR37 738 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 CCDC38Q502W7 563 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 MIS18BP1Q6P0N0 1132 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 UBE2Q1Q7Z7E8 422 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 NEK8Q86SG6 692 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 LAS2Q8IYD9 372 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 CACNA2D3Q8IZS8 1091 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 SPATA5Q8NB90 893 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 VPS37AQ8NEZ2 397 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 OSR1Q8TAX0 266 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 PIGOQ8TEQ8 1089 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 PNISRQ8TF01 805 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 TRAPPC12Q8WVT3 735 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 ASB12Q8WXK4 309 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 C18orf8Q96DM3 657 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 REXO5Q96IC2 774 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 ZNF845Q96IR2 970 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 PAGR1Q9BTK6 254 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 SAP30LQ9HAJ7 183 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 LIN7CQ9NUP9 197 aaKnown RBP3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 NDUFAF4Q9P032 175 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 IGSF9Q9P2J2 1179 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 LPAR3Q9UBY5 353 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 ZNF70Q9UC06 446 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 ASAP1Q9ULH1 1129 aa3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 C19orf53Q9UNZ5 99 aaPredicted RBP3.75□□□□□ -1.81
ECHDC1-213ENST00000474240 WDR17Q8IZU2 1322 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 CGB1A6NKQ9 187 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 IFRD1O00458 451 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 ACKR2O00590 384 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 FCHO1O14526 889 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 TCEA3O75764 348 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 ACTL6BO94805 426 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 CELA2AP08217 269 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 ATF7P17544 494 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 NDUFS1P28331 727 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 EPHB2P29323 1055 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 AKT1P31749 480 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 HOXD12P35452 270 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 GRK6P43250 576 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 AP2B1P63010 937 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 GHRHRQ02643 423 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 SRSF4Q08170 494 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 ELF2Q15723 593 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 AAK1Q2M2I8 961 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 TMEM119Q4V9L6 283 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 MEX3CQ5U5Q3 659 aaKnown RBP3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 SLC44A2Q8IWA5 706 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 CCDC117Q8IWD4 279 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 FAM47BQ8NA70 645 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 SLC22A17Q8WUG5 538 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 NPIPB3Q92617 1050 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 DPF1Q92782 380 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 KAT2BQ92831 832 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 TRIM63Q969Q1 353 aa3.74□□□□□ -1.81
ECHDC1-213ENST00000474240 C5orf34Q96MH7 638 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms