RNA–Protein interactions for RNA: ENST00000473686.5

EFCAB2-208, Transcript of EF-hand calcium binding domain 2, human

TSL 5

Gene EFCAB2, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB2-208	ENST00000473686	PCED1A	Q9H1Q7	454 aa		11.02	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CSNK1G1	Q9HCP0	422 aa		11.02	□□□□□ -0.65
EFCAB2-208	ENST00000473686	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.02	□□□□□ -0.65
EFCAB2-208	ENST00000473686	COL5A1	P20908	1838 aa	Predicted RBP	11.02	□□□□□ -0.65
EFCAB2-208	ENST00000473686	MAST4	O15021	2626 aa		11.02	□□□□□ -0.65
EFCAB2-208	ENST00000473686	NYNRIN	Q9P2P1	1898 aa	Known RBP	11.02	□□□□□ -0.65
EFCAB2-208	ENST00000473686	FAM47DP	A6NHR8	397 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686		E9PAM4	449 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	STX6	O43752	255 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	C1QL1	O75973	258 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	DNTT	P04053	509 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	ABCB4	P21439	1286 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	PIK3CA	P42336	1068 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	AMPD3	Q01432	767 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	PTPRN	Q16849	979 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	KLHDC10	Q6PID8	442 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	DBX2	Q6ZNG2	339 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	ZNF605	Q86T29	641 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	TMPRSS12	Q86WS5	348 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	GATAD2A	Q86YP4	633 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	DENND1C	Q8IV53	801 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	C1orf216	Q8TAB5	229 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	ZNF507	Q8TCN5	953 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	GANC	Q8TET4	914 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CYB5D2	Q8WUJ1	264 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	BAP1	Q92560	729 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	BIRC7	Q96CA5	298 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	P2RY11	Q96G91	374 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	ACE2	Q9BYF1	805 aa	Predicted RBP	11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	DCLK3	Q9C098	648 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	GZF1	Q9H116	711 aa	Predicted RBP	11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	VRTN	Q9H8Y1	702 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	TFIP11	Q9UBB9	837 aa	Known RBP	11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	FBXO10	Q9UK96	956 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	STRIP2	Q9ULQ0	834 aa		11.01	□□□□□ -0.65
EFCAB2-208	ENST00000473686	TK2	O00142	265 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CBX4	O00257	560 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	ENC1	O14682	589 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CAPN9	O14815	690 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	PCDHGA12	O60330	932 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	RFPL3	O75679	317 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	VNN1	O95497	513 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	KLKB1	P03952	638 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	PLA2G2A	P14555	144 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	PDC	P20941	246 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	AP3M2	P53677	418 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	SNRPF	P62306	86 aa	Known RBP	11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	COG7	P83436	770 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	DNAJC3	Q13217	504 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	ENPP2	Q13822	863 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	STK38	Q15208	465 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	BMT2	Q1RMZ1	405 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	SPOPL	Q6IQ16	392 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	UNC93A	Q86WB7	457 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	PLEKHO2	Q8TD55	490 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	PIWIL1	Q96J94	861 aa	Known RBP	11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CNDP2	Q96KP4	475 aa	Known RBP	11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	IMPG2	Q9BZV3	1241 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	SLC39A2	Q9NP94	309 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	AGO1	Q9UL18	857 aa	Known RBP	11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CLEC4E	Q9ULY5	219 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	PLA2G4C	Q9UP65	541 aa		11	□□□□□ -0.65
EFCAB2-208	ENST00000473686	TENM4	Q6N022	2769 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CFAP46	Q8IYW2	2715 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	SLC12A8	A0AV02	714 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	HHLA1	C9JL84	531 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	TLX3	O43711	291 aa	Predicted RBP	10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	TSPAN3	O60637	253 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	LDOC1	O95751	146 aa	Predicted RBP	10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	ITGAV	P06756	1048 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CD58	P19256	250 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CD27	P26842	260 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	EIF2S3	P41091	472 aa	Known RBP	10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CTSK	P43235	329 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	ASPA	P45381	313 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	SGSM1	Q2NKQ1	1148 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	HES3	Q5TGS1	186 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	TMEM215	Q68D42	235 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CHST9	Q7L1S5	443 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CCDC186	Q7Z3E2	898 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	SCD5	Q86SK9	330 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	SKA1	Q96BD8	255 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CYFIP2	Q96F07	1278 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	SLC6A18	Q96N87	628 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	TWNK	Q96RR1	684 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	USP28	Q96RU2	1077 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	HNRNPAB	Q99729	332 aa	Known RBP	10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	ARID3A	Q99856	593 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	DNAI2	Q9GZS0	605 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	BLZF1	Q9H2G9	400 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	CUEDC2	Q9H467	287 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	PRORY	Q9H606	182 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	UPF2	Q9HAU5	1272 aa	Known RBP	10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	PNPLA8	Q9NP80	782 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	AASDHPPT	Q9NRN7	309 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	KBTBD4	Q9NVX7	518 aa		10.99	□□□□□ -0.65
EFCAB2-208	ENST00000473686	MARCH2	Q9P0N8	246 aa		10.99	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms