RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CPXM2Q8N436 756 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 FAM160A2Q8N612 972 aaPredicted RBP12□□□□□ -0.49
CPNE1-222ENST00000473373 C12orf50Q8NA57 414 aaPredicted RBP12□□□□□ -0.49
CPNE1-222ENST00000473373 C1orf131Q8NDD1 294 aaKnown RBP12□□□□□ -0.49
CPNE1-222ENST00000473373 ADAM32Q8TC27 787 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 POPDC2Q9HBU9 364 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 SIX2Q9NPC8 291 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 PLCB1Q9NQ66 1216 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 FAM207AQ9NSI2 230 aaPredicted RBP12□□□□□ -0.49
CPNE1-222ENST00000473373 FANCLQ9NW38 375 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 STIM2Q9P246 746 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 TJP2Q9UDY2 1190 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 NAALADL1Q9UQQ1 740 aa12□□□□□ -0.49
CPNE1-222ENST00000473373 PLXND1Q9Y4D7 1925 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 GPR179Q6PRD1 2367 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 GREM1O60565 184 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 TBL1XO60907 577 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 GRAP2O75791 330 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 LATS1O95835 1130 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 UCHL3P15374 230 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 KIR2DL1P43626 348 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-222ENST00000473373 POLR2FP61218 127 aaKnown RBP11.99□□□□□ -0.49
CPNE1-222ENST00000473373 YWHAZP63104 245 aaKnown RBP11.99□□□□□ -0.49
CPNE1-222ENST00000473373 CDK17Q00537 523 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 CREB5Q02930 508 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 UBXN1Q04323 297 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 TYRO3Q06418 890 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 AASDHQ4L235 1098 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-222ENST00000473373 EFHC1Q5JVL4 640 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 ADGRF1Q5T601 910 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 KLHDC7AQ5VTJ3 777 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 MSANTD2Q6P1R3 559 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 KIAA1324Q6UXG2 1013 aaKnown RBP11.99□□□□□ -0.49
CPNE1-222ENST00000473373 TMEM92Q6UXU6 159 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 BHLHA9Q7RTU4 235 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 KBTBD6Q86V97 674 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 C11orf74Q86VG3 221 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 AOPEPQ8N6M6 819 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 ATP6V0D2Q8N8Y2 350 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 TMEM35BQ8NCS4 154 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 MDGA1Q8NFP4 955 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 NEK11Q8NG66 645 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 KCNV2Q8TDN2 545 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 DQX1Q8TE96 717 aaKnown RBP11.99□□□□□ -0.49
CPNE1-222ENST00000473373 STK32AQ8WU08 396 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 RTKNQ9BST9 563 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 ARRDC1-AS1Q9H2J1 176 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 NLRC4Q9NPP4 1024 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 SEPT11Q9NVA2 429 aaKnown RBP11.99□□□□□ -0.49
CPNE1-222ENST00000473373 CACNA2D2Q9NY47 1150 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 AJAP1Q9UKB5 411 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-222ENST00000473373 PCDHGC3Q9UN70 934 aa11.99□□□□□ -0.49
CPNE1-222ENST00000473373 PI4KAP42356 2102 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 ANTXRLA6NF34 631 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 SMTNL1A8MU46 457 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 DCLK1O15075 740 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 PAPSS1O43252 624 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-222ENST00000473373 ACSL4O60488 711 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 SYNCRIPO60506 623 aaKnown RBP11.98□□□□□ -0.49
CPNE1-222ENST00000473373 ABCB4P21439 1286 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 DHPSP49366 369 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-222ENST00000473373 COPB1P53618 953 aaKnown RBP11.98□□□□□ -0.49
CPNE1-222ENST00000473373 RNASE9P60153 205 aaKnown RBP11.98□□□□□ -0.49
CPNE1-222ENST00000473373 TPM4P67936 248 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 RING1Q06587 406 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 KCNMA1Q12791 1236 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 NME3Q13232 169 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 CDH18Q13634 790 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 ANO6Q4KMQ2 910 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 FNDC3BQ53EP0 1204 aaKnown RBP11.98□□□□□ -0.49
CPNE1-222ENST00000473373 FYB2Q5VWT5 728 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 RFWD3Q6PCD5 774 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 RBM43Q6ZSC3 357 aaKnown RBP11.98□□□□□ -0.49
CPNE1-222ENST00000473373 SND1Q7KZF4 910 aaKnown RBP eCLIP11.98□□□□□ -0.49
CPNE1-222ENST00000473373 TAC4Q86UU9 113 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 CHSY1Q86X52 802 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 ERICH1Q86X53 443 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 MFN1Q8IWA4 741 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 PHTF2Q8N3S3 785 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 CARNMT1Q8N4J0 409 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 ZNF557Q8N988 423 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-222ENST00000473373 HJURPQ8NCD3 748 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-222ENST00000473373 CPXM1Q96SM3 734 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 SLC2A11Q9BYW1 496 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 DDIT4Q9NX09 232 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 EBF1Q9UH73 591 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 TLR6Q9Y2C9 796 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 RAD54BQ9Y620 910 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.98□□□□□ -0.49
CPNE1-222ENST00000473373 KMT2BQ9UMN6 2715 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-222ENST00000473373 CKAP5Q14008 2032 aa11.98□□□□□ -0.49
CPNE1-222ENST00000473373 NYNRINQ9P2P1 1898 aaKnown RBP11.97□□□□□ -0.49
CPNE1-222ENST00000473373 A0A0A0MRY4 1105 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 GOLGA6L7A0A1B0GV03 622 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 PRRT4C9JH25 899 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 IRAK2O43187 625 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 HSF2BPO75031 334 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 NDUFS2O75306 463 aa11.97□□□□□ -0.49
CPNE1-222ENST00000473373 GABBR2O75899 941 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms