RNA–Protein interactions for RNA: ENST00000473230.1

RCL1-209, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3

Gene RCL1, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-209ENST00000473230 LRRC19Q9H756 370 aa7.4□□□□□ -1.22
RCL1-209ENST00000473230 SFXN1Q9H9B4 322 aa7.4□□□□□ -1.22
RCL1-209ENST00000473230 CD320Q9NPF0 282 aa7.4□□□□□ -1.22
RCL1-209ENST00000473230 SLC38A7Q9NVC3 462 aa7.4□□□□□ -1.22
RCL1-209ENST00000473230 GRHL1Q9NZI5 618 aa7.4□□□□□ -1.22
RCL1-209ENST00000473230 DNAJB4Q9UDY4 337 aa7.4□□□□□ -1.22
RCL1-209ENST00000473230 LCMT1Q9UIC8 334 aa7.4□□□□□ -1.22
RCL1-209ENST00000473230 HCN2Q9UL51 889 aa7.4□□□□□ -1.22
RCL1-209ENST00000473230 USTQ9Y2C2 406 aa7.4□□□□□ -1.22
RCL1-209ENST00000473230 HES2Q9Y543 173 aa7.4□□□□□ -1.22
RCL1-209ENST00000473230 SF3B1O75533 1304 aaKnown RBP eCLIP7.4□□□□□ -1.224e-6■■■■■ 40.4
RCL1-209ENST00000473230 TRAPPC3O43617 180 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 FAM189A1O60320 539 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 PRMT3O60678 531 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 IL18RAPO95256 599 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 LSM8O95777 96 aaKnown RBP7.39□□□□□ -1.23
RCL1-209ENST00000473230 GLUD1P00367 558 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 C1RP00736 705 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 ASS1P00966 412 aaKnown RBP7.39□□□□□ -1.23
RCL1-209ENST00000473230 CALB1P05937 261 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 THP07101 528 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 NUDT17P0C025 328 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 CD58P19256 250 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 WEE1P30291 646 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 HPDP32754 393 aaPredicted RBP7.39□□□□□ -1.23
RCL1-209ENST00000473230 ZNF132P52740 706 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 MYL6P60660 151 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 TFAMQ00059 246 aaKnown RBP7.39□□□□□ -1.23
RCL1-209ENST00000473230 MAMLD1Q13495 774 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 PTK6Q13882 451 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 KCNC3Q14003 757 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 KCTD19Q17RG1 926 aaPredicted RBP7.39□□□□□ -1.23
RCL1-209ENST00000473230 SKIDA1Q1XH10 827 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 SWI5Q1ZZU3 235 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 ZNF699Q32M78 642 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 USP41Q3LFD5 358 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 ODF2Q5BJF6 829 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 TMEM164Q5U3C3 297 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 EMC10Q5UCC4 262 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 PLEKHA7Q6IQ23 1121 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 DNAJC24Q6P3W2 148 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 SCARA5Q6ZMJ2 495 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 SYDE1Q6ZW31 735 aaPredicted RBP7.39□□□□□ -1.23
RCL1-209ENST00000473230 CROCCP2Q86T23 111 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 CDR2LQ86X02 465 aaPredicted RBP7.39□□□□□ -1.23
RCL1-209ENST00000473230 RHOT1Q8IXI2 618 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 KATNAL2Q8IYT4 538 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 VN1R2Q8NFZ6 395 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 BCAS4Q8TDM0 211 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 C1orf54Q8WWF1 131 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 SLCO2A1Q92959 643 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 ART4Q93070 314 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 ANKRD36BP1Q96IX9 119 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 CCDC114Q96M63 670 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 LRFN3Q9BTN0 628 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 HERC2P3Q9BVR0 1158 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 FAM107BQ9H098 131 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 PDZD7Q9H5P4 517 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 HOMER3Q9NSC5 361 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 PARVAQ9NVD7 372 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 SNTG2Q9NY99 539 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 ASIC3Q9UHC3 531 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 IP6K2Q9UHH9 426 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 CPSF3Q9UKF6 684 aaKnown RBP7.39□□□□□ -1.23
RCL1-209ENST00000473230 ADAM28Q9UKQ2 775 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 TNFSF13BQ9Y275 285 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 RRP15Q9Y3B9 282 aaKnown RBP7.39□□□□□ -1.23
RCL1-209ENST00000473230 CEP83Q9Y592 693 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.39□□□□□ -1.23
RCL1-209ENST00000473230 TRANK1O15050 2925 aa7.39□□□□□ -1.23
RCL1-209ENST00000473230 NLRC5Q86WI3 1866 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 SRRM3A6NNA2 597 aaPredicted RBP7.38□□□□□ -1.23
RCL1-209ENST00000473230 LOC730098B7Z3J9 87 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 EBAG9O00559 213 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 ABLIM1O14639 778 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 RECQL4O94761 1208 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 GAS8O95995 478 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 KRT1P04264 644 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 CNPP09543 421 aaKnown RBP7.38□□□□□ -1.23
RCL1-209ENST00000473230 RALAP11233 206 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 ATF2P15336 505 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 PROZP22891 400 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 BRD2P25440 801 aaKnown RBP7.38□□□□□ -1.23
RCL1-209ENST00000473230 MDH1P40925 334 aaKnown RBP7.38□□□□□ -1.23
RCL1-209ENST00000473230 KCNJ1P48048 391 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 CCT5P48643 541 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 AFF1P51825 1210 aaKnown RBP7.38□□□□□ -1.23
RCL1-209ENST00000473230 PPP2R2AP63151 447 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 DSG1Q02413 1049 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 SNX1Q13596 522 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 SLMAPQ14BN4 828 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 HIF1AQ16665 826 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 C2CD6Q53TS8 623 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 FUT10Q6P4F1 479 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 SYCE2Q6PIF2 218 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 CCDC149Q6ZUS6 474 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 OTOP3Q7RTS5 596 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 ZDHHC14Q8IZN3 488 aa7.38□□□□□ -1.23
RCL1-209ENST00000473230 TDRD5Q8NAT2 981 aaKnown RBP7.38□□□□□ -1.23
RCL1-209ENST00000473230 TMEM35BQ8NCS4 154 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms