RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ORAI3Q9BRQ5 295 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 BLZF1Q9H2G9 400 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 TNMDQ9H2S6 317 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 SLC39A2Q9NP94 309 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.81□□□□□ -0.842e-7■■■□□ 15.7
VCL-204ENST00000472585 DMAC2Q9NW81 257 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 TFIP11Q9UBB9 837 aaKnown RBP9.81□□□□□ -0.84
VCL-204ENST00000472585 FTSJ1Q9UET6 329 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 EIF2B4Q9UI10 523 aaKnown RBP9.81□□□□□ -0.84
VCL-204ENST00000472585 SLC27A6Q9Y2P4 619 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 MYLKQ15746 1914 aa9.81□□□□□ -0.84
VCL-204ENST00000472585 TLX3O43711 291 aaPredicted RBP9.8□□□□□ -0.84
VCL-204ENST00000472585 PHACTR2O75167 634 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 IGLV3-19P01714 112 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 ACADMP11310 421 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 PRKCHP24723 683 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 OXTRP30559 389 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 ASPAP45381 313 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 PLA2G4AP47712 749 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 KIF11P52732 1056 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 CLDN6P56747 220 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 CXADRP78310 365 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 ASIC1P78348 528 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 CUL4BQ13620 913 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 ZNF234Q14588 700 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 TEAD4Q15561 434 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 KIF19Q2TAC6 998 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 ZNF699Q32M78 642 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 ZNF667Q5HYK9 610 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 ERICH6BQ5W0A0 696 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 KLHDC10Q6PID8 442 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 LAYNQ6UX15 382 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 CACUL1Q86Y37 369 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 C12orf56Q8IXR9 622 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 SNX19Q92543 992 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 DHX58Q96C10 678 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 TNIP3Q96KP6 325 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 HNRNPABQ99729 332 aaKnown RBP9.8□□□□□ -0.84
VCL-204ENST00000472585 NACA2Q9H009 215 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 FBXO44Q9H4M3 255 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 C6orf106Q9H6K1 298 aaPredicted RBP9.8□□□□□ -0.84
VCL-204ENST00000472585 APOBEC3GQ9HC16 384 aaKnown RBP9.8□□□□□ -0.84
VCL-204ENST00000472585 TLR8Q9NR97 1041 aaKnown RBP9.8□□□□□ -0.84
VCL-204ENST00000472585 PTPN13Q12923 2485 aa9.8□□□□□ -0.84
VCL-204ENST00000472585 ERVH48-1M5A8F1 160 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 KLRC4O43908 158 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 EXOC3O60645 756 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 ACSL1P33121 698 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 AFF3P51826 1226 aaKnown RBP9.79□□□□□ -0.84
VCL-204ENST00000472585 STK4Q13043 487 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 BIRC3Q13489 604 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 PTPRNQ16849 979 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 KNOP1Q1ED39 458 aaKnown RBP9.79□□□□□ -0.84
VCL-204ENST00000472585 C10orf120Q5SQS8 335 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 C6orf132Q5T0Z8 1188 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 ADGRD1Q6QNK2 874 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 STXBP4Q6ZWJ1 553 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 UNC13DQ70J99 1090 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 SV2AQ7L0J3 742 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 FAM124AQ86V42 546 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 LURAP1LQ8IV03 231 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 ZC3H3Q8IXZ2 948 aaKnown RBP9.79□□□□□ -0.84
VCL-204ENST00000472585 GRAMD1CQ8IYS0 662 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 CYFIP2Q96F07 1278 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 SIPA1Q96FS4 1042 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 NUP58Q9BVL2 599 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 ELOVL2Q9NXB9 296 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 DNMT3LQ9UJW3 386 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 AGO1Q9UL18 857 aaKnown RBP9.79□□□□□ -0.84
VCL-204ENST00000472585 SNX11Q9Y5W9 270 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 USP3Q9Y6I4 520 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 NUMA1Q14980 2115 aa9.79□□□□□ -0.84
VCL-204ENST00000472585 TP53BP1Q12888 1972 aaPredicted RBP9.78□□□□□ -0.84
VCL-204ENST00000472585 ASS1P00966 412 aaKnown RBP9.78□□□□□ -0.84
VCL-204ENST00000472585 HMBSP08397 361 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 FAM200BP0CF97 657 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 CDK4P11802 303 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 CCT8P50990 548 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 SNRPFP62306 86 aaKnown RBP9.78□□□□□ -0.84
VCL-204ENST00000472585 CCDC173Q0VFZ6 552 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 SGSM1Q2NKQ1 1148 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 ZACNQ401N2 412 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 PRAMEF14Q5SWL7 426 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 ZNF276Q8N554 614 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 ZNF366Q8N895 744 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 FAM181AQ8N9Y4 354 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 KIAA0895Q8NCT3 520 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 NDRG1Q92597 394 aaKnown RBP9.78□□□□□ -0.84
VCL-204ENST00000472585 PRCCQ92733 491 aaPredicted RBP9.78□□□□□ -0.84
VCL-204ENST00000472585 FGF11Q92914 225 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 KCTD10Q9H3F6 313 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 EBF2Q9HAK2 575 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 NAGPAQ9UK23 515 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 LSM7Q9UK45 103 aaKnown RBP9.78□□□□□ -0.84
VCL-204ENST00000472585 ATP8B3O60423 1300 aa9.78□□□□□ -0.84
VCL-204ENST00000472585 PPP1R3GB7ZBB8 358 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 H0Y8X5 98 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 PYCARD-AS1I3L0S3 204 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 SPTLC2O15270 562 aa9.77□□□□□ -0.85
VCL-204ENST00000472585 POLR2DO15514 142 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms