RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 KIAA0391O15091 583 aaKnown RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 BMP10O95393 424 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 HNF4AP41235 474 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 STK4Q13043 487 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 EZH2Q15910 746 aaKnown RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ARMCX4Q5H9R4 360 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZNF473Q8WTR7 871 aaKnown RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PPP1R10Q96QC0 940 aaKnown RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TPH1P17752 444 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ACADLP28330 430 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PLK1P53350 603 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZNF57Q68EA5 555 aaPredicted RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PYHIN1Q6K0P9 492 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SNTG2Q9NY99 539 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MBD2Q9UBB5 411 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SEPT3Q9UH03 358 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 USP18Q9UMW8 372 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MYH7P12883 1935 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PEX14O75381 377 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GEMIN4P57678 1058 aaKnown RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SUZ12Q15022 739 aaKnown RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FAAH2Q6GMR7 532 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PRR5LQ6MZQ0 368 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ABCG4Q9H172 646 aa13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZNF624Q9P2J8 865 aaPredicted RBP13.56□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PDE9AO76083 593 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 HIST1H2ABP04908 130 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CUL2Q13617 745 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PPM1LQ5SGD2 360 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PDZK1Q5T2W1 519 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CES5AQ6NT32 575 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FBXL19Q6PCT2 694 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MSANTD1Q6ZTZ1 278 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 HIST3H2AQ7L7L0 130 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 HIST1H2ACQ93077 130 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TRIM63Q969Q1 353 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TMEM121Q9BTD3 319 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 VPS33BQ9H267 617 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 VPS45Q9NRW7 570 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RBM22Q9NW64 420 aaKnown RBP eCLIP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CNOT3O75175 753 aaKnown RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CCDC166P0CW27 439 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PDIA5Q14554 519 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 DEFB132Q7Z7B7 95 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CERKQ8TCT0 537 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 DLGAP2Q9P1A6 1054 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZNHIT2Q9UHR6 403 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 UBQLN1Q9UMX0 589 aaKnown RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZNF862O60290 1169 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CYLC2Q14093 348 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PCSK9Q8NBP7 692 aaKnown RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 DDX43Q9NXZ2 648 aaKnown RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 BTBD3Q9Y2F9 522 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 LRCH1Q9Y2L9 728 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 PLEKHG1Q9ULL1 1385 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KDM6AO15550 1401 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TCOF1Q13428 1488 aaKnown RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 AGTP01019 485 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 S100A9P06702 114 aaKnown RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZCCHC18P0CG32 403 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GRIK3Q13003 919 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MAPK11Q15759 364 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 LY6KQ17RY6 165 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FAM228AQ86W67 206 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MB21D2Q8IYB1 491 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CRYL1Q9Y2S2 319 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ATP7BP35670 1465 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ADGRL3Q9HAR2 1447 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 NDUFA5Q16718 116 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 AGKQ53H12 422 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TFDP3Q5H9I0 405 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SAPCD2Q86UD0 394 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 UBASH3BQ8TF42 649 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 RPH3AQ9Y2J0 694 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ROBO2Q9HCK4 1378 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 MTA2O94776 668 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 TCEA1P23193 301 aaKnown RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GJA8P48165 433 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 STX5Q13190 355 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 EMC1Q8N766 993 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FNDC5Q8NAU1 212 aa13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 GPN3Q9UHW5 284 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 HOXC12P31275 282 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 IL2P60568 153 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 NSL1Q96IY1 281 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 KHDRBS3O75525 346 aaKnown RBP13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 C4orf46Q504U0 113 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SEL1L3Q68CR1 1132 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ZNF621Q6ZSS3 439 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CYP4Z2PQ8N1L4 340 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 CHST13Q8NET6 341 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FAM120BQ96EK7 910 aaKnown RBP13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 DYTNA2CJ06 578 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 SLC16A3O15427 465 aaKnown RBP13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 VPS4BO75351 444 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 FGRP09769 529 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 ADIGQ0VDE8 80 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 COLEC12Q5KU26 742 aa13.54□□□□□ -0.24
NPHP3-ACAD11-201ENST00000471702 JAMLQ86YT9 394 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms