RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CENPBP07199 599 aaPredicted RBP7.21□□□□□ -1.26
HDAC1-204ENST00000471488 FAM200BP0CF97 657 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 RALAP11233 206 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 CDK4P11802 303 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 MYF5P13349 255 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 CKMT2P17540 419 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 TRIM21P19474 475 aaKnown RBP7.21□□□□□ -1.26
HDAC1-204ENST00000471488 CD38P28907 300 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 LONP1P36776 959 aaKnown RBP7.21□□□□□ -1.26
HDAC1-204ENST00000471488 TXLNAP40222 546 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 RPS14P62263 151 aaKnown RBP7.21□□□□□ -1.26
HDAC1-204ENST00000471488 INSM1Q01101 510 aaPredicted RBP7.21□□□□□ -1.26
HDAC1-204ENST00000471488 VAC14Q08AM6 782 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 KMT5BQ4FZB7 885 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 SLC45A4Q5BKX6 768 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 ZNF667Q5HYK9 610 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 C3orf38Q5JPI3 329 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 SNX30Q5VWJ9 437 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 FYB2Q5VWT5 728 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 RRAGBQ5VZM2 374 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 ZNF776Q68DI1 518 aaPredicted RBP7.21□□□□□ -1.26
HDAC1-204ENST00000471488 NCEH1Q6PIU2 408 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 STXBP4Q6ZWJ1 553 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 CHST9Q7L1S5 443 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 TADA2BQ86TJ2 420 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 SAP25Q8TEE9 199 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 KCNN1Q92952 543 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 HPS3Q969F9 1004 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 SYAP1Q96A49 352 aaPredicted RBP7.21□□□□□ -1.26
HDAC1-204ENST00000471488 MED8Q96G25 268 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 P2RY11Q96G91 374 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 EPSTI1Q96J88 318 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 ZSCAN31Q96LW9 406 aaPredicted RBP7.21□□□□□ -1.26
HDAC1-204ENST00000471488 CGRRF1Q99675 332 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 ABCG4Q9H172 646 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 MTG2Q9H4K7 406 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 SGK2Q9HBY8 427 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 ABCB8Q9NUT2 735 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 FBXL12Q9NXK8 326 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.21□□□□□ -1.26
HDAC1-204ENST00000471488 IL17BQ9UHF5 180 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 ADAMTS1Q9UHI8 967 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 CEP83Q9Y592 693 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 MYLKQ15746 1914 aa7.21□□□□□ -1.26
HDAC1-204ENST00000471488 COL5A1P20908 1838 aaPredicted RBP7.2□□□□□ -1.26
HDAC1-204ENST00000471488 TBC1D3DA0A087WVF3 549 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 TBC1D3IA0A087WXS9 549 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 TBC1D3EA0A087X179 549 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 TBC1D3KA0A087X1G2 549 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 TBC1D3FA6NER0 549 aaPredicted RBP7.2□□□□□ -1.26
HDAC1-204ENST00000471488 LRRC72A6NJI9 287 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 TBC1D3LB9A6J9 549 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 WNT9AO14904 365 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 MID1O15344 667 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 RNASEH1O60930 286 aaKnown RBP7.2□□□□□ -1.26
HDAC1-204ENST00000471488 PPP1R37O75864 691 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 PENKP01210 267 aaPredicted RBP7.2□□□□□ -1.26
HDAC1-204ENST00000471488 IGLV3-19P01714 112 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 KLKB1P03952 638 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 WNT1P04628 370 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 ZDHHC11BP0C7U3 371 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 TBC1D3HP0C7X1 549 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 EPHA8P29322 1005 aaPredicted RBP7.2□□□□□ -1.26
HDAC1-204ENST00000471488 MAT2AP31153 395 aaKnown RBP7.2□□□□□ -1.26
HDAC1-204ENST00000471488 STAT6P42226 847 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 PSMD8P48556 350 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 NUMBP49757 651 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 CSRP3P50461 194 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 NDST1P52848 882 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 ST8SIA6P61647 398 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 COG7P83436 770 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 CEBPZQ03701 1054 aaKnown RBP7.2□□□□□ -1.26
HDAC1-204ENST00000471488 NUMA1Q14980 2115 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 EIF4HQ15056 248 aaKnown RBP7.2□□□□□ -1.26
HDAC1-204ENST00000471488 SNRNP35Q16560 246 aaKnown RBP7.2□□□□□ -1.26
HDAC1-204ENST00000471488 POM121L1PQ3SYA9 428 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 COLEC12Q5KU26 742 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 TMEM215Q68D42 235 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 TBC1D3GQ6DHY5 549 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 TBC1D3CQ6IPX1 549 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 CCDC81Q6ZN84 652 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 PAQR9Q6ZVX9 377 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 LIMS2Q7Z4I7 341 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 NELFCDQ8IXH7 590 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 CCDC65Q8IXS2 484 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 TBC1D3Q8IZP1 549 aaPredicted RBP7.2□□□□□ -1.26
HDAC1-204ENST00000471488 FUKQ8N0W3 1084 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 C12orf29Q8N999 325 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 ZMIZ2Q8NF64 920 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 OR14C36Q8NHC7 312 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 PIWIL1Q96J94 861 aaKnown RBP7.2□□□□□ -1.26
HDAC1-204ENST00000471488 VCPIP1Q96JH7 1222 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 MYOCQ99972 504 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 SYNDIG1Q9H7V2 258 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 OSGEPQ9NPF4 335 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 PRSS16Q9NQE7 514 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 COMMD8Q9NX08 183 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 AGO1Q9UL18 857 aaKnown RBP7.2□□□□□ -1.26
HDAC1-204ENST00000471488 STRIP2Q9ULQ0 834 aa7.2□□□□□ -1.26
HDAC1-204ENST00000471488 ZNF510Q9Y2H8 683 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms