RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 GAB1Q13480 694 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 ATP1A4Q13733 1029 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 ELF2Q15723 593 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 FAM110CQ1W6H9 321 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 SLC5A9Q2M3M2 681 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 SLC35G1Q2M3R5 365 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.68□□□□□ -2.14
UBXN4-207ENST00000471246 RAP1GAP2Q684P5 730 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 CCDC144NLQ6NUI1 221 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 C9orf47Q6ZRZ4 202 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 COLCA1Q6ZS62 124 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 KIAA0408Q6ZU52 694 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 PIK3AP1Q6ZUJ8 805 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 FAM57BQ71RH2 274 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 BEND5Q7L4P6 421 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 UBE2Q1Q7Z7E8 422 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 RFX6Q8HWS3 928 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 ZDHHC17Q8IUH5 632 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 SAMD14Q8IZD0 417 aaPredicted RBP1.68□□□□□ -2.14
UBXN4-207ENST00000471246 SMRP1Q8NCR6 262 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 CCDC150Q8NCX0 1101 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 OR52L2PQ8NGH6 319 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 MPLKIPQ8TAP9 179 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 NSMCE1Q8WV22 266 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 GRAMD1AQ96CP6 724 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 P2RY11Q96G91 374 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 SENP7Q9BQF6 1050 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 COLEC11Q9BWP8 271 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 GATA5Q9BWX5 397 aaPredicted RBP1.68□□□□□ -2.14
UBXN4-207ENST00000471246 FAM234AQ9H0X4 552 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 PCDHAC1Q9H158 963 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 CDCP1Q9H5V8 836 aa1.68□□□□□ -2.14
UBXN4-207ENST00000471246 MOV10Q9HCE1 1003 aaKnown RBP1.68□□□□□ -2.14
UBXN4-207ENST00000471246 METTL14Q9HCE5 456 aaKnown RBP1.68□□□□□ -2.14
UBXN4-207ENST00000471246 PAPOLBQ9NRJ5 636 aaKnown RBP1.68□□□□□ -2.14
UBXN4-207ENST00000471246 ZMYND8Q9ULU4 1186 aaPredicted RBP1.68□□□□□ -2.14
UBXN4-207ENST00000471246 HEMK1Q9Y5R4 338 aaPredicted RBP1.68□□□□□ -2.14
UBXN4-207ENST00000471246 IGKV2D-30A0A075B6S6 120 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 TRBV5-3A0A0A0MS03 114 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 A0A0G2JK05 382 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 IGLV5-39A0A0G2JS06 123 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 GXYLT2A0PJZ3 443 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 FAM234BA2RU67 622 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 OR2W5A6NFC9 320 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 CD8B2A6NJW9 211 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 TTC34A8MYJ7 566 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 RASA4BC9J798 803 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 M0QZQ0 153 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 APAF1O14727 1248 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 DHHO43323 396 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 RASA4O43374 803 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 NCK2O43639 380 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 TLX3O43711 291 aaPredicted RBP1.67□□□□□ -2.14
UBXN4-207ENST00000471246 USP12O75317 370 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 PARNO95453 639 aaKnown RBP1.67□□□□□ -2.14
UBXN4-207ENST00000471246 VIPP01282 170 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 CRYABP02511 175 aaKnown RBP1.67□□□□□ -2.14
UBXN4-207ENST00000471246 MYL3P08590 195 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 CD63P08962 238 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 HARSP12081 509 aaKnown RBP1.67□□□□□ -2.14
UBXN4-207ENST00000471246 MMP8P22894 467 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 HOXD12P35452 270 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 STAT6P42226 847 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 GSTM5P46439 218 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 THBS3P49746 956 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 NSUN2Q08J23 767 aaKnown RBP eCLIP1.67□□□□□ -2.14
UBXN4-207ENST00000471246 DMWDQ09019 674 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 SEMA3BQ13214 749 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 SAFBQ15424 915 aaKnown RBP eCLIP1.67□□□□□ -2.14
UBXN4-207ENST00000471246 LONRF1Q17RB8 773 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 P3H1Q32P28 736 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 COBLL1Q53SF7 1204 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 EARS2Q5JPH6 523 aaKnown RBP1.67□□□□□ -2.14
UBXN4-207ENST00000471246 ACSM6Q6P461 480 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 TLDC1Q6P9B6 456 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 C16orf89Q6UX73 402 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 KYAT3Q6YP21 454 aaKnown RBP1.67□□□□□ -2.14
UBXN4-207ENST00000471246 RFX8Q6ZV50 586 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 PIM3Q86V86 326 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 RHPN2Q8IUC4 686 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 UEVLDQ8IX04 471 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 CCAR1Q8IX12 1150 aaKnown RBP1.67□□□□□ -2.14
UBXN4-207ENST00000471246 LAS2Q8IYD9 372 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 ADGRF4Q8IZF3 695 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 MMP21Q8N119 569 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 PELI3Q8N2H9 469 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 TXLNBQ8N3L3 684 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 ZFPM2Q8WW38 1151 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 GLMPQ8WWB7 406 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 ASB12Q8WXK4 309 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 OVCA2Q8WZ82 227 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 CELF1Q92879 486 aaKnown RBP1.67□□□□□ -2.14
UBXN4-207ENST00000471246 GJA10Q969M2 543 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 SLC25A28Q96A46 364 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 ZNF845Q96IR2 970 aaPredicted RBP1.67□□□□□ -2.14
UBXN4-207ENST00000471246 SNX27Q96L92 541 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 C8orf48Q96LL4 319 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 NLRP4Q96MN2 994 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 TBCBQ99426 244 aa1.67□□□□□ -2.14
UBXN4-207ENST00000471246 EIF3CQ99613 913 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms