RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PNPLA8Q9NP80 782 aa8.28□□□□□ -1.08
SMC4-212ENST00000470240 FAM49BQ9NUQ9 324 aa8.28□□□□□ -1.08
SMC4-212ENST00000470240 ETNK2Q9NVF9 386 aa8.28□□□□□ -1.08
SMC4-212ENST00000470240 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.28□□□□□ -1.083e-18■■■■■ 78.4
SMC4-212ENST00000470240 CNTN3Q9P232 1028 aa8.28□□□□□ -1.08
SMC4-212ENST00000470240 SAE1Q9UBE0 346 aaPredicted RBP8.28□□□□□ -1.08
SMC4-212ENST00000470240 TJP2Q9UDY2 1190 aa8.28□□□□□ -1.08
SMC4-212ENST00000470240 PRKAG3Q9UGI9 489 aa8.28□□□□□ -1.08
SMC4-212ENST00000470240 ZNF180Q9UJW8 692 aa8.28□□□□□ -1.08
SMC4-212ENST00000470240 HEY1Q9Y5J3 304 aa8.28□□□□□ -1.08
SMC4-212ENST00000470240 SCN4AP35499 1836 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 ZNF236Q9UL36 1845 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 IGF2BP3O00425 579 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMC4-212ENST00000470240 ATP9BO43861 1147 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 TYROBPO43914 113 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 HUS1O60921 280 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 GRAP2O75791 330 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 TMEM63AO94886 807 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 UNC5CO95185 931 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 ATP6V1G2O95670 118 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 APRTP07741 180 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 FAM163BP0C2L3 166 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 IQCF3P0C7M6 154 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 SMIM10L2AP0DMW4 78 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 SMIM10L2BP0DMW5 78 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 HOXD8P13378 290 aaPredicted RBP8.27□□□□□ -1.09
SMC4-212ENST00000470240 CYP3A5P20815 502 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 CYP2F1P24903 491 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 GCAP28676 217 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 FOXN2P32314 431 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 GNL1P36915 607 aaPredicted RBP8.27□□□□□ -1.09
SMC4-212ENST00000470240 MAGEA6P43360 314 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 NCALDP61601 193 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 SF3A3Q12874 501 aaKnown RBP eCLIP8.27□□□□□ -1.094e-10■■■■■ 210.9
SMC4-212ENST00000470240 NAB1Q13506 487 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 GRB14Q14449 540 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 ZRSR2Q15696 482 aaKnown RBP8.27□□□□□ -1.09
SMC4-212ENST00000470240 DPYSL2Q16555 572 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 FAM110CQ1W6H9 321 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 GALNTL6Q49A17 601 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 PPP6R3Q5H9R7 873 aaPredicted RBP8.27□□□□□ -1.09
SMC4-212ENST00000470240 C9orf57Q5W0N0 161 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 MAP1SQ66K74 1059 aaPredicted RBP8.27□□□□□ -1.09
SMC4-212ENST00000470240 ATG16L1Q676U5 607 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 SCARA3Q6AZY7 606 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 STRADAQ7RTN6 431 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 GPR142Q7Z601 462 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 LRRC6Q86X45 466 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 CHSY1Q86X52 802 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 ARHGAP24Q8N264 748 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 PGBD3Q8N328 593 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 TAB3Q8N5C8 712 aaPredicted RBP8.27□□□□□ -1.09
SMC4-212ENST00000470240 PLD5Q8N7P1 536 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 C7orf31Q8N865 590 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 DCAKDQ8WVC6 231 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 ZNF75CPQ92670 426 aaPredicted RBP8.27□□□□□ -1.09
SMC4-212ENST00000470240 INPP5DQ92835 1189 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 ATP2A3Q93084 1043 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 ERP27Q96DN0 273 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 ZBTB10Q96DT7 871 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 CCDC97Q96F63 343 aaPredicted RBP8.27□□□□□ -1.09
SMC4-212ENST00000470240 MAML3Q96JK9 1138 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 TINF2Q9BSI4 451 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 NAT9Q9BTE0 207 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 TSSK1BQ9BXA7 367 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 AP5M1Q9H0R1 490 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 DHX35Q9H5Z1 703 aaKnown RBP8.27□□□□□ -1.09
SMC4-212ENST00000470240 NRDE2Q9H7Z3 1164 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 MANSC1Q9H8J5 431 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 ZNF408Q9H9D4 720 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 LRRC4Q9HBW1 653 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 NOD2Q9HC29 1040 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 SLC38A7Q9NVC3 462 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 SNTG2Q9NY99 539 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 ZFP69BQ9UJL9 534 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 AP4E1Q9UPM8 1137 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 PIN4Q9Y237 131 aaKnown RBP8.27□□□□□ -1.09
SMC4-212ENST00000470240 MTO1Q9Y2Z2 717 aaKnown RBP8.27□□□□□ -1.09
SMC4-212ENST00000470240 PCDHGA11Q9Y5H2 935 aa8.27□□□□□ -1.09
SMC4-212ENST00000470240 TCRBV9S1A1TA0A576 114 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 KPNA7A9QM74 516 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 BTBD19C9JJ37 291 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 PIK3R2O00459 728 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 C2CD2LO14523 706 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 PPP1R12AO14974 1030 aaPredicted RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 XPO1O14980 1071 aaKnown RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 CSDE1O75534 798 aaKnown RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 DAB1O75553 588 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 GCATO75600 419 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 RECQL4O94761 1208 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 FBXO21O94952 628 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 APOEP02649 317 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 RPLP2P05387 115 aaKnown RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 ATP5BP06576 529 aaKnown RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 PFKMP08237 780 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 LCP1P13796 627 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 CCNB1P14635 433 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 DARSP14868 501 aaKnown RBP8.26□□□□□ -1.09
SMC4-212ENST00000470240 CCND1P24385 295 aa8.26□□□□□ -1.09
SMC4-212ENST00000470240 RBL1P28749 1068 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms