RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 Q4G0T1 1027 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 HAUS3Q68CZ6 603 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 PPP4R3AQ6IN85 833 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 TCTN3Q6NUS6 607 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 TAF2Q6P1X5 1199 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 FAM111BQ6SJ93 734 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 OTUD6AQ7L8S5 288 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 ZNF572Q7Z3I7 529 aaPredicted RBP6.89□□□□□ -1.31
PTCD3-208ENST00000469585 UBE2Q1Q7Z7E8 422 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 MDM1Q8TC05 714 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 TAAR9Q96RI9 348 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 DMRTA2Q96SC8 542 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 MAP7D2Q96T17 732 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 RBM15Q96T37 977 aaKnown RBP eCLIP6.89□□□□□ -1.31
PTCD3-208ENST00000469585 UHRF1Q96T88 793 aaPredicted RBP6.89□□□□□ -1.31
PTCD3-208ENST00000469585 GPR20Q99678 358 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 FTOQ9C0B1 505 aaKnown RBP eCLIP6.89□□□□□ -1.31
PTCD3-208ENST00000469585 LANCL2Q9NS86 450 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 EMSYQ7Z589 1322 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 NRCAMQ92823 1304 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 KIAA1217Q5T5P2 1943 aa6.89□□□□□ -1.31
PTCD3-208ENST00000469585 SMCHD1A6NHR9 2005 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 LRRC37A2A6NM11 1700 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 GOLGA6CA6NDK9 693 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 GOLGA6BA6NDN3 693 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 LAD1O00515 517 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 HBP1O60381 514 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 JAK2O60674 1132 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 LARGE1O95461 756 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 TIMP1P01033 207 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 GOLGA6DP0CG33 693 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 KCNA2P16389 499 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 MARK3P27448 753 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 MCM7P33993 719 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 GUCY1B3Q02153 619 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 APBA1Q02410 837 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 PGS1Q32NB8 556 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 HSDL1Q3SXM5 330 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 RILPL1Q5EBL4 403 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 PLPPR4Q7Z2D5 763 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 LIMS2Q7Z4I7 341 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 SESTD1Q86VW0 696 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 FBXO18Q8NFZ0 1043 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 NEK9Q8TD19 979 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 CCHCR1Q8TD31 782 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 AFAP1L1Q8TED9 768 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 BORCS6Q96GS4 357 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 CDK5RAP3Q96JB5 506 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 MRGPRX4Q96LA9 322 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 LDAHQ9H6V9 325 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 TDP1Q9NUW8 608 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 GOLGA6AQ9NYA3 693 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 PLA2G3Q9NZ20 509 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 TUBE1Q9UJT0 475 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 PCDHA12Q9UN75 941 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 ATP6V1DQ9Y5K8 247 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 SLC30A1Q9Y6M5 507 aa6.88□□□□□ -1.31
PTCD3-208ENST00000469585 DDX49Q9Y6V7 483 aaKnown RBP6.88□□□□□ -1.31
PTCD3-208ENST00000469585 COL1A2P08123 1366 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 BTBD18B2RXH4 712 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 KIF28PB7ZC32 967 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 FAM86B1E9PN63 330 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 KIAA0355O15063 1070 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 MAGEB2O15479 319 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 HOXA3O43365 443 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-208ENST00000469585 FOXS1O43638 330 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 FAM86B2P0C5J1 330 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 SMIM10L2AP0DMW4 78 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 SMIM10L2BP0DMW5 78 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 ARP10275 920 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 ALOX15P16050 662 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-208ENST00000469585 PCSK1P29120 753 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 PTPN7P35236 360 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 ANP32AP39687 249 aaKnown RBP6.87□□□□□ -1.31
PTCD3-208ENST00000469585 THPOP40225 353 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 MAGEA10P43363 369 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-208ENST00000469585 PSMC5P62195 406 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 NCBP1Q09161 790 aaKnown RBP6.87□□□□□ -1.31
PTCD3-208ENST00000469585 SP140Q13342 867 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 MTM1Q13496 603 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 GRM7Q14831 915 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 GFOD2Q3B7J2 385 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 ZNF484Q5JVG2 852 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 LCE3BQ5TA77 95 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 NCAPH2Q6IBW4 605 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 CCSAPQ6IQ19 270 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-208ENST00000469585 MFSD5Q6N075 450 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 SWSAP1Q6NVH7 229 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 FAM43BQ6ZT52 329 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-208ENST00000469585 TTLL10Q6ZVT0 673 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 PDZD4Q76G19 769 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-208ENST00000469585 TRMT1LQ7Z2T5 733 aaKnown RBP6.87□□□□□ -1.31
PTCD3-208ENST00000469585 TTC7BQ86TV6 843 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 TDHQ8IZJ6 230 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 FUKQ8N0W3 1084 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 METTL13Q8N6R0 699 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 CASKIN2Q8WXE0 1202 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 BADQ92934 168 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 RAB24Q969Q5 203 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 RELTQ969Z4 430 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms