RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 DGKQP52824 942 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 ACTR2P61160 394 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 SF3A3Q12874 501 aaKnown RBP eCLIP5.79□□□□□ -1.481e-7■■■■□ 19.8
LSM5-209ENST00000468872 BFSP2Q13515 415 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 EFR3AQ14156 821 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 GALNTL6Q49A17 601 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 ANKRD45Q5TZF3 282 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 PAPD7Q5XG87 772 aaKnown RBP5.79□□□□□ -1.48
LSM5-209ENST00000468872 ZNF551Q7Z340 670 aaPredicted RBP5.79□□□□□ -1.48
LSM5-209ENST00000468872 LRRTM4Q86VH4 590 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 CPOQ8IVL8 374 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 OR4N4Q8N0Y3 316 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.79□□□□□ -1.48
LSM5-209ENST00000468872 HMGB4Q8WW32 186 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 ASB12Q8WXK4 309 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 OVCA2Q8WZ82 227 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 USP13Q92995 863 aaPredicted RBP5.79□□□□□ -1.48
LSM5-209ENST00000468872 SDCCAG3Q96C92 435 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 RIC8AQ9NPQ8 531 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 G6PC2Q9NQR9 355 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 ARHGEF3Q9NR81 526 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 DLL3Q9NYJ7 618 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 NFU1Q9UMS0 254 aa5.79□□□□□ -1.48
LSM5-209ENST00000468872 A0A1B0GVC2 190 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 SLC38A8A6NNN8 435 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 EFCAB8A8MWE9 144 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 TISP43B9A030 160 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 EYA2O00167 538 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 CA12O43570 354 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 TK1P04183 234 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 PRKCGP05129 697 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 POLBP06746 335 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 CYP21A2P08686 494 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 ALADP13716 330 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 DRD4P21917 467 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 ADRA1DP25100 572 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 AARSP49588 968 aaKnown RBP eCLIP5.78□□□□□ -1.48
LSM5-209ENST00000468872 CDK7P50613 346 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 CCT8P50990 548 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 PSG6Q00889 435 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 SEMA3BQ13214 749 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 RPS6KA2Q15349 733 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 PLAC9Q5JTB6 97 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 PARS2Q7L3T8 475 aaKnown RBP5.78□□□□□ -1.48
LSM5-209ENST00000468872 P3H2Q8IVL5 708 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 SIRT6Q8N6T7 355 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 RP9Q8TA86 221 aaKnown RBP5.78□□□□□ -1.48
LSM5-209ENST00000468872 HERVK_113Q902F9 699 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 DDB2Q92466 427 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 CPT1BQ92523 772 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 PRR11Q96HE9 360 aaPredicted RBP5.78□□□□□ -1.48
LSM5-209ENST00000468872 VPS50Q96JG6 964 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 LENG8Q96PV6 779 aaPredicted RBP5.78□□□□□ -1.48
LSM5-209ENST00000468872 EIF3CQ99613 913 aaKnown RBP5.78□□□□□ -1.48
LSM5-209ENST00000468872 ABHD16BQ9H3Z7 469 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 SAP30LQ9HAJ7 183 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 DUSP22Q9NRW4 184 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 RXFP3Q9NSD7 469 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 SERTAD4Q9NUC0 356 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 KCND3Q9UK17 655 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 CCNL1Q9UK58 526 aaPredicted RBP5.78□□□□□ -1.48
LSM5-209ENST00000468872 ZBTB1Q9Y2K1 713 aa5.78□□□□□ -1.48
LSM5-209ENST00000468872 E7EVH7 732 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 CES2O00748 559 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 KRT38O76015 456 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 LARGE1O95461 756 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 EBLN1P0CF75 366 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 ENGP17813 658 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 SERPINA4P29622 427 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 CYP2C18P33260 490 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 PAPOLAP51003 745 aaKnown RBP5.77□□□□□ -1.49
LSM5-209ENST00000468872 FAM3BP58499 235 aaPredicted RBP5.77□□□□□ -1.49
LSM5-209ENST00000468872 KRTAP10-11P60412 298 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 SUMO2P61956 95 aaKnown RBP5.77□□□□□ -1.49
LSM5-209ENST00000468872 DNASE1L3Q13609 305 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 PTCHD4Q6ZW05 846 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 KRT27Q7Z3Y8 459 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 GLCCI1Q86VQ1 547 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 NPIPB3Q92617 1050 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 GOLGA1Q92805 767 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 COG8Q96MW5 612 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 CCDC134Q9H6E4 229 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 KCNK9Q9NPC2 374 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 FBXO28Q9NVF7 368 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 NDUFAF4Q9P032 175 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 RNF7Q9UBF6 113 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 ZNF69Q9UC07 566 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 ANAPC4Q9UJX5 808 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 AMFRQ9UKV5 643 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 PCDHB2Q9Y5E7 798 aa5.77□□□□□ -1.49
LSM5-209ENST00000468872 CCDC187A0A096LP49 1063 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 FAM90A20PA6NIJ5 464 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 H0YIZ8 118 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 CELA2AP08217 269 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 DLDP09622 509 aaKnown RBP5.76□□□□□ -1.49
LSM5-209ENST00000468872 RXRAP19793 462 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 THBS4P35443 961 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 DIO1P49895 249 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 TFF2Q03403 129 aa5.76□□□□□ -1.49
LSM5-209ENST00000468872 SMAD1Q15797 465 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 327.7 ms