RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 KCTD13Q8WZ19 329 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 SLC5A5Q92911 643 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 LENG9Q96B70 501 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 TCTN2Q96GX1 697 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 C1orf159Q96HA4 380 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 PGBD1Q96JS3 809 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 CCDC140Q96MF4 163 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 TEKT3Q9BXF9 490 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 NFKBIZQ9BYH8 718 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 DHX33Q9H6R0 707 aaKnown RBP5.95□□□□□ -1.46
PTCD3-207ENST00000467273 MINDY3Q9H8M7 445 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 MIOSQ9NXC5 875 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 OBP2AQ9NY56 170 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 KLHL14Q9P2G3 628 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 DKK4Q9UBT3 224 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 NDOR1Q9UHB4 597 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 EVLQ9UI08 416 aaPredicted RBP5.95□□□□□ -1.46
PTCD3-207ENST00000467273 TCFL5Q9UL49 500 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 TPCN1Q9ULQ1 816 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 SLC8A2Q9UPR5 921 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 PCDHA5Q9Y5H7 936 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 TAF6LQ9Y6J9 622 aa5.95□□□□□ -1.46
PTCD3-207ENST00000467273 NUP205Q92621 2012 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 VWA8A3KMH1 1905 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 CAPN8A6NHC0 703 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 HEPACAM2A8MVW5 462 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 OVOL3O00110 214 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 SH2B2O14492 632 aaPredicted RBP5.94□□□□□ -1.46
PTCD3-207ENST00000467273 PRRG1O14668 218 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 ADAM12O43184 909 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 TSPAN1O60635 241 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 PSMD10O75832 226 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 ABLIM3O94929 683 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 FSHBP01225 129 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 THP07101 528 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 IFNGR1P15260 489 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 ATF2P15336 505 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 GNA11P29992 359 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 HOXD12P35452 270 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 PCBP3P57721 371 aaKnown RBP5.94□□□□□ -1.46
PTCD3-207ENST00000467273 PSMC5P62195 406 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 TFDP1Q14186 410 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 PLEKHG6Q3KR16 790 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 FBXO43Q4G163 708 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 TRIM61Q5EBN2 209 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 SLC35F1Q5T1Q4 408 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 LRCH2Q5VUJ6 765 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 TPGS2Q68CL5 300 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 TCEAL6Q6IPX3 200 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 SLC27A1Q6PCB7 646 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 B3GNT9Q6UX72 402 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 ZPBP2Q6X784 338 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 SYNE3Q6ZMZ3 975 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 ANO5Q75V66 913 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 BRAPQ7Z569 592 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 PIP4P1Q86T03 277 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 THNSL2Q86YJ6 484 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 RNF149Q8NC42 400 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 BICD2Q8TD16 824 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 PRPF31Q8WWY3 499 aaKnown RBP5.94□□□□□ -1.46
PTCD3-207ENST00000467273 TCEAL3Q969E4 200 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 EXOC4Q96A65 974 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 EIF2AQ9BY44 585 aaKnown RBP5.94□□□□□ -1.46
PTCD3-207ENST00000467273 ZMYND12Q9H0C1 365 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 UNC45AQ9H3U1 944 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 NXF3Q9H4D5 531 aaKnown RBP5.94□□□□□ -1.46
PTCD3-207ENST00000467273 SMOC1Q9H4F8 434 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 TRIM39Q9HCM9 518 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 GPRC5CQ9NQ84 441 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 RBM12Q9NTZ6 932 aaKnown RBP5.94□□□□□ -1.46
PTCD3-207ENST00000467273 SFMBT1Q9UHJ3 866 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 KLK13Q9UKR3 277 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 CNOT11Q9UKZ1 510 aaKnown RBP5.94□□□□□ -1.46
PTCD3-207ENST00000467273 CDY1Q9Y6F8 540 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 CELSR3Q9NYQ7 3312 aa5.94□□□□□ -1.46
PTCD3-207ENST00000467273 SDK1Q7Z5N4 2213 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 hCG_1642624A0A1W2PR95 340 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 TMEM82A0PJX8 343 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 SLC38A8A6NNN8 435 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 AURKAO14965 403 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 MSH4O15457 936 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 PRC1O43663 620 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 EXTL3O43909 919 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 FGF19O95750 216 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 CPP00450 1065 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 SRGAP2CP0DJJ0 459 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 RCAN1P53805 252 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 PTENP60484 403 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 GABREP78334 506 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 GRSF1Q12849 480 aaKnown RBP eCLIP5.93□□□□□ -1.46
PTCD3-207ENST00000467273 SEMA3BQ13214 749 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 GLIPR1L2Q4G1C9 344 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 SPDYCQ5MJ68 293 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 NT5DC1Q5TFE4 455 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 JAKMIP3Q5VZ66 844 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 PMS2CLQ68D20 193 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 CNNM4Q6P4Q7 775 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 USP53Q70EK8 1073 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 MIER3Q7Z3K6 550 aa5.93□□□□□ -1.46
PTCD3-207ENST00000467273 FGD2Q7Z6J4 655 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms