RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 RNF40O75150 1001 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 BEST1O76090 585 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 OLFM2O95897 454 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 F9P00740 461 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 OAS1P00973 400 aaKnown RBP6.9□□□□□ -1.3
UBXN4-205ENST00000467065 EGFP01133 1207 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 MMEP08473 750 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 MBL2P11226 248 aaPredicted RBP6.9□□□□□ -1.3
UBXN4-205ENST00000467065 KRT3P12035 628 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 TCF3P15923 654 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 HNRNPH3P31942 346 aaKnown RBP6.9□□□□□ -1.3
UBXN4-205ENST00000467065 GJA4P35212 333 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 PBX1P40424 430 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 PRKCIP41743 596 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 PI4KAP42356 2102 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 FNTBP49356 437 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 KIF11P52732 1056 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 SLC5A3P53794 718 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 YWHAZP63104 245 aaKnown RBP6.9□□□□□ -1.3
UBXN4-205ENST00000467065 APBA1Q02410 837 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 PDE4CQ08493 712 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 GRSF1Q12849 480 aaKnown RBP eCLIP6.9□□□□□ -1.3
UBXN4-205ENST00000467065 PPP2R5DQ14738 602 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 SLC18A3Q16572 532 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 CLEC16AQ2KHT3 1053 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 ARL13BQ3SXY8 428 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 TMEM196Q5HYL7 178 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 NAA35Q5VZE5 725 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 DNAJC24Q6P3W2 148 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 PRR23BQ6ZRT6 265 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 IRF2BP2Q7Z5L9 587 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 NOP9Q86U38 636 aaKnown RBP6.9□□□□□ -1.3
UBXN4-205ENST00000467065 LRRC8AQ8IWT6 810 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 RHOT2Q8IXI1 618 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 ZMIZ2Q8NF64 920 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 EPS8L1Q8TE68 723 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 OSCP1Q8WVF1 389 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 KCTD13Q8WZ19 329 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 OVCA2Q8WZ82 227 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 IRGQQ8WZA9 623 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 RUBCNQ92622 972 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 SECISBP2LQ93073 1101 aaKnown RBP6.9□□□□□ -1.3
UBXN4-205ENST00000467065 ATP2A3Q93084 1043 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 EXOC4Q96A65 974 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 ALS2CR12Q96Q35 445 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 SMOQ99835 787 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 DDX50Q9BQ39 737 aaKnown RBP6.9□□□□□ -1.3
UBXN4-205ENST00000467065 FAM126AQ9BYI3 521 aaPredicted RBP6.9□□□□□ -1.3
UBXN4-205ENST00000467065 RNF38Q9H0F5 515 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 EPC1Q9H2F5 836 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 ECT2Q9H8V3 914 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 CNGB3Q9NQW8 809 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 ABCC13Q9NSE7 274 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 RRN3Q9NYV6 651 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 GMIPQ9P107 970 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 CTTNBP2NLQ9P2B4 639 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 MYO1AQ9UBC5 1043 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 NAGPAQ9UK23 515 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.9□□□□□ -1.3
UBXN4-205ENST00000467065 CPQQ9Y646 472 aa6.9□□□□□ -1.3
UBXN4-205ENST00000467065 CACNA1AO00555 2505 aa6.9□□□□□ -1.31
UBXN4-205ENST00000467065 ADAMTS9Q9P2N4 1935 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 TYW5A2RUC4 315 aaKnown RBP6.89□□□□□ -1.31
UBXN4-205ENST00000467065 ANTXRLA6NF34 631 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 EIF3CLB5ME19 914 aaKnown RBP6.89□□□□□ -1.31
UBXN4-205ENST00000467065 GOLGA8SH3BPF8 625 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 RNF225M0QZC1 329 aaPredicted RBP6.89□□□□□ -1.31
UBXN4-205ENST00000467065 O00370 1275 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 TRDMT1O14717 391 aaKnown RBP6.89□□□□□ -1.31
UBXN4-205ENST00000467065 TNFRSF10BO14763 440 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 COCHO43405 550 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 GLI1P08151 1106 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 PNMA6AP0CW24 399 aaPredicted RBP6.89□□□□□ -1.31
UBXN4-205ENST00000467065 IRF1P10914 325 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 SLC2A3P11169 496 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 NCAM1P13591 858 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 PFKLP17858 780 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 ABCB4P21439 1286 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 ATP5C1P36542 298 aaKnown RBP6.89□□□□□ -1.31
UBXN4-205ENST00000467065 PLA2G4AP47712 749 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 PXNP49023 591 aaPredicted RBP6.89□□□□□ -1.31
UBXN4-205ENST00000467065 HARS2P49590 506 aaKnown RBP6.89□□□□□ -1.31
UBXN4-205ENST00000467065 PGFP49763 221 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 RGS7P49802 495 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 GALK1P51570 392 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 SLC7A9P82251 487 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 COG7P83436 770 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 TBX2Q13207 712 aaPredicted RBP6.89□□□□□ -1.31
UBXN4-205ENST00000467065 HADHQ16836 314 aaKnown RBP6.89□□□□□ -1.31
UBXN4-205ENST00000467065 HECTD3Q5T447 861 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 FAM102AQ5T9C2 384 aaPredicted RBP6.89□□□□□ -1.31
UBXN4-205ENST00000467065 DENND1BQ6P3S1 775 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 CLEC20AQ6ZU45 233 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 GPRIN1Q7Z2K8 1008 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 PIGZQ86VD9 579 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 DDX42Q86XP3 938 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBXN4-205ENST00000467065 SCUBE3Q8IX30 993 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 SYCE1Q8N0S2 351 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 RPLP0P6Q8NHW5 317 aa6.89□□□□□ -1.31
UBXN4-205ENST00000467065 SLC30A5Q8TAD4 765 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms