RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 NUGGCQ68CJ6 796 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 POLNQ7Z5Q5 900 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 DDX42Q86XP3 938 aaKnown RBP eCLIP11.57□□□□□ -0.56
VCP-204ENST00000466100 SYCE1Q8N0S2 351 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 SH3RF2Q8TEC5 729 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 TEKT4Q8WW24 435 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 KRT35Q92764 455 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 AZIN2Q96A70 460 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 HES6Q96HZ4 224 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 ALS2CR12Q96Q35 445 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 SNRNP25Q9BV90 132 aaKnown RBP11.57□□□□□ -0.56
VCP-204ENST00000466100 TKTL2Q9H0I9 626 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 TMPRSS4Q9NRS4 437 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.57□□□□□ -0.56
VCP-204ENST00000466100 CFAP97Q9P2B7 532 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 XPO7Q9UIA9 1087 aaKnown RBP11.57□□□□□ -0.56
VCP-204ENST00000466100 FZD10Q9ULW2 581 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 KIAA1549LQ6ZVL6 1849 aa11.57□□□□□ -0.56
VCP-204ENST00000466100 MIA3Q5JRA6 1907 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 TICRRQ7Z2Z1 1910 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 GFRA2O00451 464 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 PSTPIP1O43586 416 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 SPOPO43791 374 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 PRPSAP2O60256 369 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 LATS1O95835 1130 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 RARAP10276 462 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 IRF1P10914 325 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 SLC2A3P11169 496 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 DESP17661 470 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 CTNNA2P26232 953 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 CORO1AP31146 461 aaKnown RBP11.56□□□□□ -0.56
VCP-204ENST00000466100 CTNNA1P35221 906 aaKnown RBP11.56□□□□□ -0.56
VCP-204ENST00000466100 ARSEP51690 589 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 AIF1P55008 147 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 TFF2Q03403 129 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 SEMA3BQ13214 749 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 CA9Q16790 459 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 FAM133BQ5BKY9 247 aaKnown RBP11.56□□□□□ -0.56
VCP-204ENST00000466100 MEI1Q5TIA1 1274 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 PIK3R6Q5UE93 754 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 MANEALQ5VSG8 457 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 NADSYN1Q6IA69 706 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 PTCRAQ6ISU1 281 aaPredicted RBP11.56□□□□□ -0.56
VCP-204ENST00000466100 HTR3DQ70Z44 454 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 SND1Q7KZF4 910 aaKnown RBP eCLIP11.56□□□□□ -0.561e-9■□□□□ 9.2
VCP-204ENST00000466100 OTOP3Q7RTS5 596 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 PEX26Q7Z412 305 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 UNC45BQ8IWX7 931 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 FAM217AQ8IXS0 508 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 ZNF683Q8IZ20 524 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 SLC35F6Q8N357 371 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 KIAA1958Q8N8K9 716 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 FAM71BQ8TC56 605 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 WDR24Q96S15 920 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 HAPLN3Q96S86 360 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 PRMT1Q99873 361 aaKnown RBP11.56□□□□□ -0.56
VCP-204ENST00000466100 TLR10Q9BXR5 811 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 MAGEB5Q9BZ81 275 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 WDCPQ9H6R7 721 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 OBP2AQ9NY56 170 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 PCSK1NQ9UHG2 260 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 STOML2Q9UJZ1 356 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 AGO1Q9UL18 857 aaKnown RBP11.56□□□□□ -0.56
VCP-204ENST00000466100 PACSIN2Q9UNF0 486 aaPredicted RBP11.56□□□□□ -0.56
VCP-204ENST00000466100 NEU3Q9UQ49 428 aa11.56□□□□□ -0.56
VCP-204ENST00000466100 E2F8A0AVK6 867 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 C2CD4DB7Z1M9 353 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 ANHXE9PGG2 379 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 DDX3YO15523 660 aaKnown RBP11.55□□□□□ -0.56
VCP-204ENST00000466100 KIF5CO60282 957 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 PAGE1O75459 146 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 MOCS2O96007 188 aaPredicted RBP11.55□□□□□ -0.56
VCP-204ENST00000466100 APOEP02649 317 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 GBP2P32456 591 aaPredicted RBP11.55□□□□□ -0.56
VCP-204ENST00000466100 VIPR2P41587 438 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 PEX5P50542 639 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 NRG1Q02297 640 aaPredicted RBP11.55□□□□□ -0.56
VCP-204ENST00000466100 HTR4Q13639 388 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 DPYSL2Q16555 572 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 SMTNL2Q2TAL5 461 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 PUS10Q3MIT2 529 aaKnown RBP11.55□□□□□ -0.56
VCP-204ENST00000466100 ATP13A4Q4VNC1 1196 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 KCNT1Q5JUK3 1230 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 ZNF569Q5MCW4 686 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 ERMARDQ5T6L9 678 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 TANGO2Q6ICL3 276 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 SCYL2Q6P3W7 929 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 PSTKQ8IV42 348 aaKnown RBP11.55□□□□□ -0.56
VCP-204ENST00000466100 RHOT1Q8IXI2 618 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 CELF5Q8N6W0 485 aaKnown RBP11.55□□□□□ -0.56
VCP-204ENST00000466100 UBE2Q2Q8WVN8 375 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 ALG3Q92685 438 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 FGF14Q92915 247 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 ACSF2Q96CM8 615 aaPredicted RBP11.55□□□□□ -0.56
VCP-204ENST00000466100 BTN2A3PQ96KV6 586 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 PHF7Q9BWX1 381 aaPredicted RBP11.55□□□□□ -0.56
VCP-204ENST00000466100 DCLK3Q9C098 648 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 OSBPL2Q9H1P3 480 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 ZWILCHQ9H900 591 aa11.55□□□□□ -0.56
VCP-204ENST00000466100 GPATCH2LQ9NWQ4 482 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms