RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 NPC1O15118 1278 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 CDK4P11802 303 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 MAP3K7CLP57077 242 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 RACK1P63244 317 aaKnown RBP15.72■□□□□ 0.11
HDAC6-214ENST00000465269 TNNC1P63316 161 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 GABREP78334 506 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 C10orf120Q5SQS8 335 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 KIAA0895LQ68EN5 471 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 SCARA5Q6ZMJ2 495 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 GPD1LQ8N335 351 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 EXD3Q8N9H8 876 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 CYLDQ9NQC7 956 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 TLR8Q9NR97 1041 aaKnown RBP15.72■□□□□ 0.11
HDAC6-214ENST00000465269 EXOC7Q9UPT5 735 aa15.72■□□□□ 0.11
HDAC6-214ENST00000465269 A0A1W2PPC4 97 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 DFNA5O60443 496 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 SDC3O75056 442 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 DLATP10515 647 aaKnown RBP15.71■□□□□ 0.11
HDAC6-214ENST00000465269 RARGP13631 454 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 CKMT2P17540 419 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 UCNP55089 124 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 MYL6P60660 151 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 GOLGA8FQ08AF8 430 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 GOLGA8DPQ0D2H9 430 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 KCNJ12Q14500 433 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 C8orf34Q49A92 452 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 ACOT1Q86TX2 421 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 ZC3H3Q8IXZ2 948 aaKnown RBP15.71■□□□□ 0.11
HDAC6-214ENST00000465269 RDH13Q8NBN7 331 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 GANCQ8TET4 914 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 RFFLQ8WZ73 363 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 SMARCD1Q96GM5 515 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 LLPHQ9BRT6 129 aaKnown RBP15.71■□□□□ 0.11
HDAC6-214ENST00000465269 SDCBP2Q9H190 292 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 PRSS16Q9NQE7 514 aa15.71■□□□□ 0.11
HDAC6-214ENST00000465269 ANKRD17O75179 2603 aaKnown RBP15.7■□□□□ 0.1
HDAC6-214ENST00000465269 A0A1W2PR77 199 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 DNTTP04053 509 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 MYF5P13349 255 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 CORO1AP31146 461 aaKnown RBP15.7■□□□□ 0.1
HDAC6-214ENST00000465269 HMGN5P82970 282 aaKnown RBP15.7■□□□□ 0.1
HDAC6-214ENST00000465269 ARID5AQ03989 594 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 SFMBT2Q5VUG0 894 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 NCEH1Q6PIU2 408 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 KANSL1Q7Z3B3 1105 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 SLC2A14Q8TDB8 520 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 DNAJC19Q96DA6 116 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 VCPIP1Q96JH7 1222 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 ZNF578Q96N58 590 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-214ENST00000465269 GZF1Q9H116 711 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-214ENST00000465269 TMEM245Q9H330 911 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 FAM49BQ9NUQ9 324 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.7■□□□□ 0.1
HDAC6-214ENST00000465269 HMGXB4Q9UGU5 601 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 LIMCH1Q9UPQ0 1083 aa15.7■□□□□ 0.1
HDAC6-214ENST00000465269 HEMK1Q9Y5R4 338 aaPredicted RBP15.7■□□□□ 0.1
HDAC6-214ENST00000465269 ATP8B3O60423 1300 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 ZNF233A6NK53 670 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 TRIM38O00635 465 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 USP12O75317 370 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 CD38P28907 300 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 PLA2G4AP47712 749 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 GALCP54803 685 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 PROX2Q3B8N5 592 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 RILPL1Q5EBL4 403 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 ARL6IP4Q66PJ3 421 aaKnown RBP15.69■□□□□ 0.1
HDAC6-214ENST00000465269 SCD5Q86SK9 330 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 SPATS2Q86XZ4 545 aaKnown RBP15.69■□□□□ 0.1
HDAC6-214ENST00000465269 WDR49Q8IV35 697 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 DENND1CQ8IV53 801 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 HPS3Q969F9 1004 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 CCDC127Q96BQ5 260 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 AK8Q96MA6 479 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 FAM117AQ9C073 453 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 XYLT2Q9H1B5 865 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 SGK2Q9HBY8 427 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 ASCL3Q9NQ33 180 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 GDF3Q9NR23 364 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 ADAMTS1Q9UHI8 967 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 RASAL2Q9UJF2 1139 aa15.69■□□□□ 0.1
HDAC6-214ENST00000465269 AGO1Q9UL18 857 aaKnown RBP15.69■□□□□ 0.1
HDAC6-214ENST00000465269 PMS2P1A4D2B8 440 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 TERTO14746 1132 aaKnown RBP15.68■□□□□ 0.1
HDAC6-214ENST00000465269 SIGLEC6O43699 453 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 IDEP14735 1019 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 TNNI1P19237 187 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 ADORA2BP29275 332 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 ILKQ13418 452 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 EIF4HQ15056 248 aaKnown RBP15.68■□□□□ 0.1
HDAC6-214ENST00000465269 C12orf29Q8N999 325 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 DDI1Q8WTU0 396 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 ZNF516Q92618 1163 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 EPSTI1Q96J88 318 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 COMMD8Q9NX08 183 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 ANKMY1Q9P2S6 941 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 NAGPAQ9UK23 515 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 SCML2Q9UQR0 700 aa15.68■□□□□ 0.1
HDAC6-214ENST00000465269 A0A1W2PNU3 283 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-214ENST00000465269 HHLA1C9JL84 531 aa15.67■□□□□ 0.1
HDAC6-214ENST00000465269 CLSTN1O94985 981 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms