RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 AWAT1Q58HT5 328 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 ATPAF1Q5TC12 328 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-205ENST00000464541 SLC18B1Q6NT16 456 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 LAS2Q8IYD9 372 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 VPS37AQ8NEZ2 397 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 ASB12Q8WXK4 309 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 DDB2Q92466 427 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 NPIPB3Q92617 1050 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 MAP4K1Q92918 833 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 ZNF845Q96IR2 970 aaPredicted RBP6.79□□□□□ -1.32
PTCD3-205ENST00000464541 ARL8BQ9NVJ2 186 aa6.79□□□□□ -1.32
PTCD3-205ENST00000464541 ZNF804BA4D1E1 1349 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 LOC105369274A0A096LPK9 316 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 LOC102723532A0A0G2JNH3 316 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 M0QZQ0 153 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 NKX2-8O15522 239 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 DNPH1O43598 174 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 BCAR3O75815 825 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 LARGE1O95461 756 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 CER1O95813 267 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 PRR35P0CG20 571 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 SFPQP23246 707 aaKnown RBP eCLIP6.78□□□□□ -1.32
PTCD3-205ENST00000464541 MPGP29372 298 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 DAZAP2Q15038 168 aaPredicted RBP6.78□□□□□ -1.32
PTCD3-205ENST00000464541 MORN5Q5VZ52 161 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 GGT6Q6P531 493 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 KYAT3Q6YP21 454 aaKnown RBP6.78□□□□□ -1.32
PTCD3-205ENST00000464541 YTHDF3Q7Z739 585 aaKnown RBP6.78□□□□□ -1.32
PTCD3-205ENST00000464541 UBE2Q1Q7Z7E8 422 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 OR4N4Q8N0Y3 316 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 LTV1Q96GA3 475 aaPredicted RBP6.78□□□□□ -1.32
PTCD3-205ENST00000464541 RTKNQ9BST9 563 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 PRSS22Q9GZN4 317 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 DACT1Q9NYF0 836 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 ZBTB1Q9Y2K1 713 aa6.78□□□□□ -1.32
PTCD3-205ENST00000464541 HEMK1Q9Y5R4 338 aaPredicted RBP6.78□□□□□ -1.32
PTCD3-205ENST00000464541 SMIM35A0A1B0GVV1 85 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 EFCAB8A8MWE9 144 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 PRYO14603 147 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 RPP40O75818 363 aaKnown RBP6.77□□□□□ -1.33
PTCD3-205ENST00000464541 SGPL1O95470 568 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 LDHAP00338 332 aaKnown RBP6.77□□□□□ -1.33
PTCD3-205ENST00000464541 KLRK1P26718 216 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 TLE3Q04726 772 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 KPNB1Q14974 876 aaKnown RBP6.77□□□□□ -1.33
PTCD3-205ENST00000464541 SEC23BQ15437 767 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 PDCD2Q16342 344 aaPredicted RBP6.77□□□□□ -1.33
PTCD3-205ENST00000464541 AAK1Q2M2I8 961 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 WDR93Q6P2C0 686 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 C16orf89Q6UX73 402 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 CACNA2D3Q8IZS8 1091 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 BCAS4Q8TDM0 211 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 ERVK-5Q9HDB9 667 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 PDGFCQ9NRA1 345 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 ASNSD1Q9NWL6 643 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 PI4KBQ9UBF8 816 aa6.77□□□□□ -1.33
PTCD3-205ENST00000464541 ACKR2O00590 384 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 FCHO1O14526 889 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 PEX14O75381 377 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 TNFRSF6BO95407 300 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 AKT1P31749 480 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 THBS4P35443 961 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 AGTR2P50052 363 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 ZNF84P51523 738 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 GHRHRQ02643 423 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 GAB1Q13480 694 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 CCDC38Q502W7 563 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 TANGO2Q6ICL3 276 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 UEVLDQ8IX04 471 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 ATG16L2Q8NAA4 619 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 ADPRHL1Q8NDY3 354 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 SRFBP1Q8NEF9 429 aaKnown RBP6.76□□□□□ -1.33
PTCD3-205ENST00000464541 REXO5Q96IC2 774 aaKnown RBP6.76□□□□□ -1.33
PTCD3-205ENST00000464541 ELOVL1Q9BW60 279 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 QTRT1Q9BXR0 403 aaKnown RBP6.76□□□□□ -1.33
PTCD3-205ENST00000464541 TRIM2Q9C040 744 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 CNTN6Q9UQ52 1028 aa6.76□□□□□ -1.33
PTCD3-205ENST00000464541 C3orf70A6NLC5 250 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-205ENST00000464541 INPPL1O15357 1258 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 ACTL6BO94805 426 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 ENO1P06733 434 aaKnown RBP6.75□□□□□ -1.33
PTCD3-205ENST00000464541 CYP3A4P08684 503 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 CD63P08962 238 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 CDK4P11802 303 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 ATP5F1P24539 256 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-205ENST00000464541 ABCG1P45844 678 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 VPS41P49754 854 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 CFHR1Q03591 330 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 TBRG1Q3YBR2 411 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 MTX3Q5HYI7 312 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 ZNF569Q5MCW4 686 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 NFRKBQ6P4R8 1299 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 KLHL17Q6TDP4 642 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 DEF8Q6ZN54 512 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 RAB11FIP2Q7L804 512 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 SLC44A2Q8IWA5 706 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-205ENST00000464541 CUL5Q93034 780 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 GATA5Q9BWX5 397 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-205ENST00000464541 CCDC134Q9H6E4 229 aa6.75□□□□□ -1.33
PTCD3-205ENST00000464541 PRDM8Q9NQV8 689 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms