RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 TMEM131Q92545 1883 aa21.73■■□□□ 1.07
CPSF7-209ENST00000463244 ASXL3Q9C0F0 2248 aa21.72■■□□□ 1.07
CPSF7-209ENST00000463244 COL28A1Q2UY09 1125 aa21.72■■□□□ 1.07
CPSF7-209ENST00000463244 ZNF394Q53GI3 561 aa21.72■■□□□ 1.07
CPSF7-209ENST00000463244 RAB41Q5JT25 222 aa21.72■■□□□ 1.07
CPSF7-209ENST00000463244 SERPINA13PQ6UXR4 307 aa21.72■■□□□ 1.07
CPSF7-209ENST00000463244 INTS8Q75QN2 995 aaKnown RBP21.72■■□□□ 1.07
CPSF7-209ENST00000463244 TMPRSS7Q7RTY8 843 aa21.72■■□□□ 1.07
CPSF7-209ENST00000463244 PDZD3Q86UT5 571 aa21.72■■□□□ 1.07
CPSF7-209ENST00000463244 ARHGAP18Q8N392 663 aa21.72■■□□□ 1.07
CPSF7-209ENST00000463244 DDI1Q8WTU0 396 aa21.72■■□□□ 1.07
CPSF7-209ENST00000463244 STRIP2Q9ULQ0 834 aa21.72■■□□□ 1.07
CPSF7-209ENST00000463244 MUC22E2RYF6 1773 aaPredicted RBP21.71■■□□□ 1.07
CPSF7-209ENST00000463244 A0A1B0GVT2 93 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 FLRT2O43155 660 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 TIMM44O43615 452 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 F13A1P00488 732 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 ZSCAN22P10073 491 aaPredicted RBP21.71■■□□□ 1.07
CPSF7-209ENST00000463244 C7P10643 843 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 NR2F2P24468 414 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 NFIL3Q16649 462 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 ATL3Q6DD88 541 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 OR2T3Q8NH03 318 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 RHBDD1Q8TEB9 315 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 HEXIM2Q96MH2 286 aaKnown RBP21.71■■□□□ 1.07
CPSF7-209ENST00000463244 CDC6Q99741 560 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 UBXN6Q9BZV1 441 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 SLCO1B1Q9Y6L6 691 aa21.71■■□□□ 1.07
CPSF7-209ENST00000463244 SLC12A8A0AV02 714 aa21.7■■□□□ 1.06
CPSF7-209ENST00000463244 ATXN1LP0C7T5 689 aaKnown RBP21.7■■□□□ 1.06
CPSF7-209ENST00000463244 HLA-EP13747 358 aa21.7■■□□□ 1.06
CPSF7-209ENST00000463244 CSNK1EP49674 416 aaKnown RBP21.7■■□□□ 1.06
CPSF7-209ENST00000463244 AFF3P51826 1226 aaKnown RBP21.7■■□□□ 1.06
CPSF7-209ENST00000463244 YWHAGP61981 247 aaKnown RBP eCLIP21.7■■□□□ 1.06
CPSF7-209ENST00000463244 ARID5AQ03989 594 aa21.7■■□□□ 1.06
CPSF7-209ENST00000463244 ENPEPQ07075 957 aa21.7■■□□□ 1.06
CPSF7-209ENST00000463244 CAMK2GQ13555 558 aaPredicted RBP21.7■■□□□ 1.06
CPSF7-209ENST00000463244 SOWAHCQ53LP3 525 aaPredicted RBP21.7■■□□□ 1.06
CPSF7-209ENST00000463244 RSRC2Q7L4I2 434 aaKnown RBP21.7■■□□□ 1.06
CPSF7-209ENST00000463244 FAM124AQ86V42 546 aa21.7■■□□□ 1.06
CPSF7-209ENST00000463244 PIGZQ86VD9 579 aa21.7■■□□□ 1.06
CPSF7-209ENST00000463244 CCDC150Q8NCX0 1101 aa21.7■■□□□ 1.06
CPSF7-209ENST00000463244 PLD4Q96BZ4 506 aa21.7■■□□□ 1.06
CPSF7-209ENST00000463244 C6orf106Q9H6K1 298 aaPredicted RBP21.7■■□□□ 1.06
CPSF7-209ENST00000463244 MMRN2Q9H8L6 949 aa21.7■■□□□ 1.06
CPSF7-209ENST00000463244 MYL1P05976 194 aa21.69■■□□□ 1.06
CPSF7-209ENST00000463244 HOXD9P28356 352 aaPredicted RBP21.69■■□□□ 1.06
CPSF7-209ENST00000463244 TTC39CQ8N584 583 aa21.69■■□□□ 1.06
CPSF7-209ENST00000463244 SLC4A11Q8NBS3 891 aa21.69■■□□□ 1.06
CPSF7-209ENST00000463244 SNX19Q92543 992 aa21.69■■□□□ 1.06
CPSF7-209ENST00000463244 LHX5Q9H2C1 402 aa21.69■■□□□ 1.06
CPSF7-209ENST00000463244 TMEM8AQ9HCN3 771 aa21.69■■□□□ 1.06
CPSF7-209ENST00000463244 DKK4Q9UBT3 224 aa21.69■■□□□ 1.06
CPSF7-209ENST00000463244 RCOR1Q9UKL0 485 aa21.69■■□□□ 1.06
CPSF7-209ENST00000463244 RAXQ9Y2V3 346 aa21.69■■□□□ 1.06
CPSF7-209ENST00000463244 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.69■■□□□ 1.06
CPSF7-209ENST00000463244 HELZ2Q9BYK8 2649 aaKnown RBP21.69■■□□□ 1.06
CPSF7-209ENST00000463244 KRT13P13646 458 aa21.68■■□□□ 1.06
CPSF7-209ENST00000463244 HLA-FP30511 346 aa21.68■■□□□ 1.06
CPSF7-209ENST00000463244 ACSL1P33121 698 aa21.68■■□□□ 1.06
CPSF7-209ENST00000463244 SUZ12Q15022 739 aaKnown RBP21.68■■□□□ 1.06
CPSF7-209ENST00000463244 TRIP4Q15650 581 aaPredicted RBP21.68■■□□□ 1.06
CPSF7-209ENST00000463244 KIF19Q2TAC6 998 aa21.68■■□□□ 1.06
CPSF7-209ENST00000463244 MPPE1Q53F39 396 aa21.68■■□□□ 1.06
CPSF7-209ENST00000463244 FAM186BQ8IYM0 893 aa21.68■■□□□ 1.06
CPSF7-209ENST00000463244 FAXDC2Q96IV6 333 aa21.68■■□□□ 1.06
CPSF7-209ENST00000463244 ARID3AQ99856 593 aa21.68■■□□□ 1.06
CPSF7-209ENST00000463244 TMEM245Q9H330 911 aa21.68■■□□□ 1.06
CPSF7-209ENST00000463244 CFAP45Q9UL16 551 aa21.68■■□□□ 1.06
CPSF7-209ENST00000463244 BTBD3Q9Y2F9 522 aa21.68■■□□□ 1.06
CPSF7-209ENST00000463244 PFKFB1P16118 471 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 PSMC2P35998 433 aaKnown RBP21.67■■□□□ 1.06
CPSF7-209ENST00000463244 TKTL1P51854 596 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 RAD23BP54727 409 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 MCCD1P59942 119 aaPredicted RBP21.67■■□□□ 1.06
CPSF7-209ENST00000463244 PDE4CQ08493 712 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 ARHGAP17Q68EM7 881 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 KRT39Q6A163 491 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 PM20D1Q6GTS8 502 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 BHLHA9Q7RTU4 235 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 FMNL3Q8IVF7 1028 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 ANKRD52Q8NB46 1076 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 SEMA4DQ92854 862 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 TMEM176AQ96HP8 235 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 OSGEPQ9NPF4 335 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 SCUBE2Q9NQ36 999 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 CISHQ9NSE2 258 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 USP25Q9UHP3 1055 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 ANKRD6Q9Y2G4 727 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 SNX11Q9Y5W9 270 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 KALRNO60229 2985 aa21.67■■□□□ 1.06
CPSF7-209ENST00000463244 A0A1B0GVL5 298 aa21.66■■□□□ 1.06
CPSF7-209ENST00000463244 ZBED1O96006 694 aa21.66■■□□□ 1.06
CPSF7-209ENST00000463244 GTF2H1P32780 548 aa21.66■■□□□ 1.06
CPSF7-209ENST00000463244 GRIA4P48058 902 aa21.66■■□□□ 1.06
CPSF7-209ENST00000463244 HARS2P49590 506 aaKnown RBP21.66■■□□□ 1.06
CPSF7-209ENST00000463244 SLC8A3P57103 927 aa21.66■■□□□ 1.06
CPSF7-209ENST00000463244 DNM1Q05193 864 aaKnown RBP21.66■■□□□ 1.06
CPSF7-209ENST00000463244 TEAD4Q15561 434 aa21.66■■□□□ 1.06
CPSF7-209ENST00000463244 FNDC3BQ53EP0 1204 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms