RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 SYNCRIPO60506 623 aaKnown RBP16.43■□□□□ 0.22
SND1-203ENST00000463020 NR3C1P04150 777 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 SGSHP51688 502 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 ZNF394Q53GI3 561 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 CCDC157Q569K6 752 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 SLC9A9Q8IVB4 645 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 NUP58Q9BVL2 599 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 DUSP16Q9BY84 665 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 MTG2Q9H4K7 406 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 TM9SF3Q9HD45 589 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 PNPLA8Q9NP80 782 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 SCUBE2Q9NQ36 999 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 SERTAD1Q9UHV2 236 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.43■□□□□ 0.22
SND1-203ENST00000463020 PCDHGB2Q9Y5G2 931 aa16.43■□□□□ 0.22
SND1-203ENST00000463020 URB1O60287 2271 aaKnown RBP16.43■□□□□ 0.22
SND1-203ENST00000463020 H0Y8X5 98 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 CBX4O00257 560 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 TSPAN3O60637 253 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 RPN1P04843 607 aaKnown RBP16.42■□□□□ 0.22
SND1-203ENST00000463020 P4HA1P13674 534 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 HOXD9P28356 352 aaPredicted RBP16.42■□□□□ 0.22
SND1-203ENST00000463020 HLA-FP30511 346 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 OXTRP30559 389 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 GCLMP48507 274 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 PTPRNQ16849 979 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 KMT5BQ4FZB7 885 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 CEP135Q66GS9 1140 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 SERPINA13PQ6UXR4 307 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 FAM217AQ8IXS0 508 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 WFDC5Q8TCV5 224 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 TMC2Q8TDI7 906 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 TAF4BQ92750 862 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 BIRC7Q96CA5 298 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 ARID3AQ99856 593 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 NT5C1AQ9BXI3 368 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 TMEM245Q9H330 911 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 CLIC5Q9NZA1 410 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 DKK4Q9UBT3 224 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 PCDHA7Q9UN72 937 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 ANKRD6Q9Y2G4 727 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 ASXL3Q9C0F0 2248 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 CABIN1Q9Y6J0 2220 aa16.42■□□□□ 0.22
SND1-203ENST00000463020 GOLGA4Q13439 2230 aaKnown RBP16.41■□□□□ 0.22
SND1-203ENST00000463020 SLC12A8A0AV02 714 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 FLRT2O43155 660 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 ACTN4O43707 911 aaKnown RBP16.41■□□□□ 0.22
SND1-203ENST00000463020 YEATS4O95619 227 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 ACADMP11310 421 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 CAMK2GQ13555 558 aaPredicted RBP16.41■□□□□ 0.22
SND1-203ENST00000463020 PRAMEF14Q5SWL7 426 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 RESP18Q5W5W9 173 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 IL27RAQ6UWB1 636 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 DHRS13Q6UX07 377 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 ADIPOR2Q86V24 386 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 ZNF276Q8N554 614 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 OR2T3Q8NH03 318 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 ADAM32Q8TC27 787 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 DDI1Q8WTU0 396 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 TMEM174Q8WUU8 243 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 SEMA4DQ92854 862 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 LHX5Q9H2C1 402 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 MMRN2Q9H8L6 949 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 MARCH2Q9P0N8 246 aa16.41■□□□□ 0.22
SND1-203ENST00000463020 GOLGA6L3A6NEY3 463 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 RALAP11233 206 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 CHKAP35790 457 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 AFF3P51826 1226 aaKnown RBP16.4■□□□□ 0.22
SND1-203ENST00000463020 ZNF132P52740 706 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 RPS14P62263 151 aaKnown RBP16.4■□□□□ 0.22
SND1-203ENST00000463020 SMAD1Q15797 465 aaKnown RBP16.4■□□□□ 0.22
SND1-203ENST00000463020 RAB41Q5JT25 222 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 PIGZQ86VD9 579 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 CPXM2Q8N436 756 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 SLC4A11Q8NBS3 891 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 GOLGA5Q8TBA6 731 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 PAGE5Q96GU1 130 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 CDC6Q99741 560 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 NIF3L1Q9GZT8 377 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 EBF2Q9HAK2 575 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 MAGEF1Q9HAY2 307 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 PRSS16Q9NQE7 514 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 ZNF510Q9Y2H8 683 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 ATMQ13315 3056 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 MGAQ8IWI9 3026 aa16.4■□□□□ 0.22
SND1-203ENST00000463020 A0A087WV48 116 aa16.39■□□□□ 0.21
SND1-203ENST00000463020 NPC1O15118 1278 aa16.39■□□□□ 0.21
SND1-203ENST00000463020 C1QL1O75973 258 aa16.39■□□□□ 0.21
SND1-203ENST00000463020 FSBPO95073 299 aa16.39■□□□□ 0.21
SND1-203ENST00000463020 IGHV4-34P06331 123 aa16.39■□□□□ 0.21
SND1-203ENST00000463020 C7P10643 843 aa16.39■□□□□ 0.21
SND1-203ENST00000463020 ITPKBP27987 946 aa16.39■□□□□ 0.21
SND1-203ENST00000463020 CTSKP43235 329 aa16.39■□□□□ 0.21
SND1-203ENST00000463020 PSEN1P49768 467 aa16.39■□□□□ 0.21
SND1-203ENST00000463020 VAMP7P51809 220 aa16.39■□□□□ 0.21
SND1-203ENST00000463020 YWHAGP61981 247 aaKnown RBP eCLIP16.39■□□□□ 0.21
SND1-203ENST00000463020 COG7P83436 770 aa16.39■□□□□ 0.21
SND1-203ENST00000463020 EIF4HQ15056 248 aaKnown RBP16.39■□□□□ 0.21
SND1-203ENST00000463020 FNDC3BQ53EP0 1204 aaKnown RBP16.39■□□□□ 0.21
SND1-203ENST00000463020 UCMAQ8WVF2 138 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms