RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 ACTR3P61158 418 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 OLIG2Q13516 323 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 FAM187BQ17R55 369 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 LIN52Q52LA3 116 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 MTHFD1LQ6UB35 978 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 ARHGAP22Q7Z5H3 698 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 ST13P4Q8IZP2 240 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-208ENST00000463007 C12orf29Q8N999 325 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 OXCT2Q9BYC2 517 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-208ENST00000463007 ZNF518BQ9C0D4 1074 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 C2orf40Q9H1Z8 148 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 PDP2Q9P2J9 529 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 TEX264Q9Y6I9 313 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 KLHL33A6NCF5 533 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 PRPSAP2O60256 369 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 GSTA2P09210 222 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 EIF4BP23588 611 aaKnown RBP12.83□□□□□ -0.36
HDAC4-208ENST00000463007 POLR2BP30876 1174 aaKnown RBP12.83□□□□□ -0.36
HDAC4-208ENST00000463007 SERPINB5P36952 375 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 IREB2P48200 963 aaKnown RBP12.83□□□□□ -0.36
HDAC4-208ENST00000463007 N4BP2L1Q5TBK1 243 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-208ENST00000463007 EEF1DP3Q658K8 133 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 RNF111Q6ZNA4 994 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 MOB2Q70IA6 237 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 PTAR1Q7Z6K3 402 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-208ENST00000463007 WDR75Q8IWA0 830 aaKnown RBP12.83□□□□□ -0.36
HDAC4-208ENST00000463007 FBXO16Q8IX29 292 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-208ENST00000463007 EXOC8Q8IYI6 725 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 STKLD1Q8NE28 680 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 ABTB1Q969K4 478 aaPredicted RBP12.83□□□□□ -0.36
HDAC4-208ENST00000463007 SPATA16Q9BXB7 569 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 SOX13Q9UN79 622 aa12.83□□□□□ -0.36
HDAC4-208ENST00000463007 HBS1LQ9Y450 684 aaKnown RBP12.83□□□□□ -0.36
HDAC4-208ENST00000463007 APOC4-APOC2K7ER74 178 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 HNRNPRO43390 633 aaKnown RBP12.82□□□□□ -0.36
HDAC4-208ENST00000463007 PEX1O43933 1283 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 APOC2P02655 101 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 GJA5P36382 358 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 SCNN1BP51168 640 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 IGBP1P78318 339 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 POU5F1BQ06416 359 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 TAZQ16635 292 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 DUOXA2Q1HG44 320 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 TRMT5Q32P41 509 aaKnown RBP12.82□□□□□ -0.36
HDAC4-208ENST00000463007 EFHC1Q5JVL4 640 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 UNC5AQ6ZN44 842 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 SDCCAG8Q86SQ7 713 aaPredicted RBP12.82□□□□□ -0.36
HDAC4-208ENST00000463007 ANKRD13AQ8IZ07 590 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 PHTF2Q8N3S3 785 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 TTC13Q8NBP0 860 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 COPS5Q92905 334 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 MPP4Q96JB8 637 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 MARK4Q96L34 752 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 CNBD2Q96M20 576 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 CENPKQ9BS16 269 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 CDT1Q9H211 546 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 FAM49BQ9NUQ9 324 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 KCNK4Q9NYG8 393 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 TNFSF13BQ9Y275 285 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 MRPL42Q9Y6G3 142 aaKnown RBP12.82□□□□□ -0.36
HDAC4-208ENST00000463007 RFPL1O75677 317 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 ARHGAP1Q07960 439 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 GK3PQ14409 553 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 SURF1Q15526 300 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 CA9Q16790 459 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 LGSNQ5TDP6 509 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 RXFP2Q8WXD0 754 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 USP13Q92995 863 aaPredicted RBP12.82□□□□□ -0.36
HDAC4-208ENST00000463007 KATNBL1Q9H079 304 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 FIS1Q9Y3D6 152 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 TTLL3Q9Y4R7 772 aa12.82□□□□□ -0.36
HDAC4-208ENST00000463007 PDCD11Q14690 1871 aaKnown RBP12.82□□□□□ -0.36
HDAC4-208ENST00000463007 A0A088AWK7 358 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 WDR27A2RRH5 827 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 CAPN14A8MX76 684 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 A8MXQ7 604 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 KRT38O76015 456 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 DHRS4L1P0CG22 281 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 CXCL8P10145 99 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 GRIA2P42262 883 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 ITGA9Q13797 1035 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 KRT72Q14CN4 511 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 ACAP1Q15027 740 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 IL31Q6EBC2 164 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 DHDDSQ86SQ9 333 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 SPNS2Q8IVW8 549 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 CDCA5Q96FF9 252 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 IFT43Q96FT9 208 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 AGAP3Q96P47 875 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 DHRS4Q9BTZ2 278 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 SDCBP2Q9H190 292 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 LHX5Q9H2C1 402 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 VRTNQ9H8Y1 702 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 GINS2Q9Y248 185 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 GOLGA8TH3BQL2 631 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 USP12O75317 370 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 METTL18O95568 372 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 PKNOX1P55347 436 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 ATF7IP2Q5U623 682 aa12.81□□□□□ -0.36
HDAC4-208ENST00000463007 NET1Q7Z628 596 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms