RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 CRNKL1Q9BZJ0 848 aaKnown RBP5.57□□□□□ -1.52
COPS3-204ENST00000462236 REXO4Q9GZR2 422 aaKnown RBP5.57□□□□□ -1.52
COPS3-204ENST00000462236 PDGFCQ9NRA1 345 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 SMC4Q9NTJ3 1288 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 NYAP2Q9P242 653 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 FBXO40Q9UH90 709 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 TESMINQ9Y4I5 508 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 PAXBP1Q9Y5B6 917 aa5.57□□□□□ -1.52
COPS3-204ENST00000462236 ASB14A6NK59 587 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 DRGXA6NNA5 263 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 ISM1B1AKI9 464 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 KIAA0391O15091 583 aaKnown RBP5.56□□□□□ -1.52
COPS3-204ENST00000462236 TRIM24O15164 1050 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 MGEA5O60502 916 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 NDUFB10O96000 172 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 CHEK2O96017 543 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 GNAI2P04899 355 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 RAP2BP61225 183 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 HDAC1Q13547 482 aaPredicted RBP5.56□□□□□ -1.52
COPS3-204ENST00000462236 SEMA5AQ13591 1074 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 POLD3Q15054 466 aaPredicted RBP5.56□□□□□ -1.52
COPS3-204ENST00000462236 PRKD1Q15139 912 aaPredicted RBP5.56□□□□□ -1.52
COPS3-204ENST00000462236 CNN3Q15417 329 aaKnown RBP5.56□□□□□ -1.52
COPS3-204ENST00000462236 SAFBQ15424 915 aaKnown RBP eCLIP5.56□□□□□ -1.52
COPS3-204ENST00000462236 DUSP28Q4G0W2 176 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 RNF220Q5VTB9 566 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 C1QL3Q5VWW1 255 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 PPP4R4Q6NUP7 873 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 NFRKBQ6P4R8 1299 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 KRT78Q8N1N4 520 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 LCORLQ8N3X6 602 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 ZNF808Q8N4W9 903 aaPredicted RBP5.56□□□□□ -1.52
COPS3-204ENST00000462236 FAM156AQ8NDB6 213 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 LRTOMTQ8WZ04 291 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 PABPC5Q96DU9 382 aaKnown RBP5.56□□□□□ -1.52
COPS3-204ENST00000462236 MRPL38Q96DV4 380 aaKnown RBP5.56□□□□□ -1.52
COPS3-204ENST00000462236 LOXL4Q96JB6 756 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 WWC2-AS2Q96NR7 200 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 MNTQ99583 582 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 RAD9AQ99638 391 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 PRRX2Q99811 253 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 MYOCQ99972 504 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 GPR87Q9BY21 358 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 SIK2Q9H0K1 926 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 NUP62CLQ9H1M0 184 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 DEF6Q9H4E7 631 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 BRD9Q9H8M2 597 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 A1CFQ9NQ94 594 aaKnown RBP5.56□□□□□ -1.52
COPS3-204ENST00000462236 ATP8A2Q9NTI2 1148 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 PIH1D1Q9NWS0 290 aaKnown RBP5.56□□□□□ -1.52
COPS3-204ENST00000462236 DDX49Q9Y6V7 483 aaKnown RBP5.56□□□□□ -1.52
COPS3-204ENST00000462236 DOCK6Q96HP0 2047 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 DENND4AQ7Z401 1863 aa5.56□□□□□ -1.52
COPS3-204ENST00000462236 ZFYVE26Q68DK2 2539 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 CYP2D7A0A087X1C5 515 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 LOC102724159A0A0B4J2E5 919 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 A0A1W2PPL8 197 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 TCRBV7S2A1N4TA0A589 114 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 F5H6K3 240 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 FOXN3O00409 490 aaPredicted RBP5.55□□□□□ -1.52
COPS3-204ENST00000462236 PRKAB2O43741 272 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 NBNO60934 754 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 GCSHP23434 173 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 ACRV1P26436 265 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 RARSP54136 660 aaKnown RBP5.55□□□□□ -1.52
COPS3-204ENST00000462236 HTRA4P83105 476 aaPredicted RBP5.55□□□□□ -1.52
COPS3-204ENST00000462236 KLRC3Q07444 240 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 PWP2Q15269 919 aaKnown RBP5.55□□□□□ -1.52
COPS3-204ENST00000462236 LLGL1Q15334 1064 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 CSRP2Q16527 193 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 KIAA0753Q2KHM9 967 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 TMCO2Q7Z6W1 182 aaPredicted RBP5.55□□□□□ -1.52
COPS3-204ENST00000462236 SESTD1Q86VW0 696 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 CAGE1Q8TC20 777 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 KBTBD7Q8WVZ9 684 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 SCAMP4Q969E2 229 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 C1QTNF3Q9BXJ4 246 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 LRRC27Q9C0I9 530 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 BTBD1Q9H0C5 482 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 GPR35Q9HC97 309 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 RAVER2Q9HCJ3 691 aaKnown RBP5.55□□□□□ -1.52
COPS3-204ENST00000462236 ZFHX4Q86UP3 3567 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 C2orf16Q68DN1 1984 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 PLIN4Q96Q06 1357 aa5.55□□□□□ -1.52
COPS3-204ENST00000462236 ANKRD11Q6UB99 2663 aaPredicted RBP5.54□□□□□ -1.52
COPS3-204ENST00000462236 ZNF532Q9HCE3 1301 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 SPAG17Q6Q759 2223 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 ABHD14A-ACY1A0A1B0GW23 586 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 H3BNC9 293 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 H3BQ06 376 aaPredicted RBP5.54□□□□□ -1.52
COPS3-204ENST00000462236 MBTPS2O43462 519 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 PLA2G6O60733 806 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 ZBED4O75132 1171 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 RECQL4O94761 1208 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 MATN4O95460 622 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 THP07101 528 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 LINC00271P0C7V0 271 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 CKBP12277 381 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 MXRA7P84157 204 aa5.54□□□□□ -1.52
COPS3-204ENST00000462236 BFSP2Q13515 415 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms