RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PDE1AP54750 535 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 SOX10P56693 466 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 MRPS35P82673 323 aaKnown RBP3.42□□□□□ -1.86
HDAC6-212ENST00000461608 BFSP2Q13515 415 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 SLC12A1Q13621 1099 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 CYP1B1Q16678 543 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 CCDC142Q17RM4 750 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 AAK1Q2M2I8 961 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 GALNTL6Q49A17 601 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 GLE1Q53GS7 698 aaKnown RBP3.42□□□□□ -1.86
HDAC6-212ENST00000461608 EPHA10Q5JZY3 1008 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 FAAH2Q6GMR7 532 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 RETSATQ6NUM9 610 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 ACSM6Q6P461 480 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 RASGRP2Q7LDG7 609 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 GRASPQ7Z6J2 395 aaPredicted RBP3.42□□□□□ -1.86
HDAC6-212ENST00000461608 TMTC1Q8IUR5 882 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 SUGP1Q8IWZ8 645 aaKnown RBP3.42□□□□□ -1.86
HDAC6-212ENST00000461608 ESX1Q8N693 406 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 METTL25Q8N6Q8 603 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 TSPYL6Q8N831 410 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 ACTRT2Q8TDY3 377 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 LINC00476Q8WZB0 136 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 CTHRC1Q96CG8 243 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 KTI12Q96EK9 354 aaPredicted RBP3.42□□□□□ -1.86
HDAC6-212ENST00000461608 COG8Q96MW5 612 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 TWNKQ96RR1 684 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 SYNPO2LQ9H987 977 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 SERTAD4Q9NUC0 356 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 TBX20Q9UMR3 447 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 FER1L4A9Z1Z3 1794 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 ITIH6Q6UXX5 1313 aa3.42□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D3DA0A087WVF3 549 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D3IA0A087WXS9 549 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D3EA0A087X179 549 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D3KA0A087X1G2 549 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D3BA6NDS4 549 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D3FA6NER0 549 aaPredicted RBP3.41□□□□□ -1.86
HDAC6-212ENST00000461608 FAM90A20PA6NIJ5 464 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TTC34A8MYJ7 566 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 KIF28PB7ZC32 967 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D3LB9A6J9 549 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 EYA2O00167 538 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 GUCY1B2O75343 617 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 ESRRBO95718 433 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 PDHA1P08559 390 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 IFIT1P09914 478 aaKnown RBP3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D3HP0C7X1 549 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TMIGD3P0DMS9 266 aaPredicted RBP3.41□□□□□ -1.86
HDAC6-212ENST00000461608 NR2F6P10588 404 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 CDK4P11802 303 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 RXRAP19793 462 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 BMP5P22003 454 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 PCSK6P29122 969 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 ELF1P32519 619 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 MAN1A1P33908 653 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 MCM5P33992 734 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 PNPLA4P41247 253 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 SEC24CP53992 1094 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 GEMIN4P57678 1058 aaKnown RBP3.41□□□□□ -1.86
HDAC6-212ENST00000461608 EEFSECP57772 596 aaKnown RBP3.41□□□□□ -1.86
HDAC6-212ENST00000461608 E2F1Q01094 437 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 SP2Q02086 613 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 RNASELQ05823 741 aaKnown RBP3.41□□□□□ -1.86
HDAC6-212ENST00000461608 GOLGA8FQ08AF8 430 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TBL3Q12788 808 aaKnown RBP3.41□□□□□ -1.86
HDAC6-212ENST00000461608 MAPK7Q13164 816 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 SLC4A8Q2Y0W8 1093 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 FAM153CQ494X1 144 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 HYIQ5T013 277 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D3GQ6DHY5 549 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D3CQ6IPX1 549 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 GRHL2Q6ISB3 625 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 ANO7Q6IWH7 933 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 RRAGAQ7L523 313 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 CPOQ8IVL8 374 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TBC1D3Q8IZP1 549 aaPredicted RBP3.41□□□□□ -1.86
HDAC6-212ENST00000461608 ANKRD44Q8N8A2 993 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 FAM71DQ8N9W8 422 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 PCYOX1LQ8NBM8 494 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 ASB12Q8WXK4 309 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 NPIPB3Q92617 1050 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 CAVIN3Q969G5 261 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 SH3KBP1Q96B97 665 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 NPAS1Q99742 590 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 SLC26A6Q9BXS9 759 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 WDR11Q9BZH6 1224 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 CDCP1Q9H5V8 836 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TMEM160Q9NX00 188 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 GAR1Q9NY12 217 aaKnown RBP3.41□□□□□ -1.86
HDAC6-212ENST00000461608 TFCP2L1Q9NZI6 479 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 ANKFY1Q9P2R3 1169 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 MGAT4CQ9UBM8 478 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 PNMA2Q9UL42 364 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 MAFFQ9ULX9 164 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 ADAMTS5Q9UNA0 930 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 GDAQ9Y2T3 454 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 SPATA31A1Q5TZJ5 1347 aa3.41□□□□□ -1.86
HDAC6-212ENST00000461608 VWC2LB2RUY7 222 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms