RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 TRIP4Q15650 581 aaPredicted RBP10.92□□□□□ -0.66
HDLBP-227ENST00000458564 HLA-BQ31612 363 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 ARHGAP17Q68EM7 881 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 PM20D1Q6GTS8 502 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 SERPINA13PQ6UXR4 307 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 TMPRSS7Q7RTY8 843 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 PIGZQ86VD9 579 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 DENND1CQ8IV53 801 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 CCDC150Q8NCX0 1101 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 OR2T3Q8NH03 318 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 CDC6Q99741 560 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 MIR1-1HGQ9H1L0 117 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 TMEM245Q9H330 911 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 FBRSQ9HAH7 460 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 TMEM8AQ9HCN3 771 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 EIF2B4Q9UI10 523 aaKnown RBP10.92□□□□□ -0.66
HDLBP-227ENST00000458564 STOML2Q9UJZ1 356 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 RCOR1Q9UKL0 485 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 CFAP45Q9UL16 551 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 CLEC4EQ9ULY5 219 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 MUC22E2RYF6 1773 aaPredicted RBP10.92□□□□□ -0.66
HDLBP-227ENST00000458564 CABIN1Q9Y6J0 2220 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 PLXNB3Q9ULL4 1909 aa10.92□□□□□ -0.66
HDLBP-227ENST00000458564 RHOBTB3O94955 611 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 LATS1O95835 1130 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 EPHX1P07099 455 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 HMBSP08397 361 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 KRT13P13646 458 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 PFKFB1P16118 471 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 GRIA4P48058 902 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 YWHAGP61981 247 aaKnown RBP eCLIP10.91□□□□□ -0.66
HDLBP-227ENST00000458564 ZBTB16Q05516 673 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 ZCWPW2Q504Y3 356 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 KRT39Q6A163 491 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 RSRC2Q7L4I2 434 aaKnown RBP10.91□□□□□ -0.66
HDLBP-227ENST00000458564 BHLHA9Q7RTU4 235 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 FAM186BQ8IYM0 893 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.91□□□□□ -0.663e-6■■■■□ 23.9
HDLBP-227ENST00000458564 ANKRD52Q8NB46 1076 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 SLC4A11Q8NBS3 891 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 WFIKKN2Q8TEU8 576 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 SETD7Q8WTS6 366 aaKnown RBP10.91□□□□□ -0.66
HDLBP-227ENST00000458564 DDI1Q8WTU0 396 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 SORCS1Q8WY21 1168 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 SNX21Q969T3 373 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 CIPCQ9C0C6 399 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 SCUBE2Q9NQ36 999 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 OLA1Q9NTK5 396 aaKnown RBP10.91□□□□□ -0.66
HDLBP-227ENST00000458564 HPSEQ9Y251 543 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.91□□□□□ -0.66
HDLBP-227ENST00000458564 ADAMTS20P59510 1910 aa10.91□□□□□ -0.66
HDLBP-227ENST00000458564 A0A1B0GVT2 93 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 SLC12A8A0AV02 714 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 PCDHGA12O60330 932 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 ZBED1O96006 694 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 CENPBP07199 599 aaPredicted RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 CMA1P23946 247 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 RPL13P26373 211 aaKnown RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 HLA-FP30511 346 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 PSMC2P35998 433 aaKnown RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 RAD23BP54727 409 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 SLC8A3P57103 927 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 ARID5AQ03989 594 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 FOXD4L6Q3SYB3 417 aaPredicted RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 MPPE1Q53F39 396 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 ZNF394Q53GI3 561 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 FOXD4L5Q5VV16 416 aaPredicted RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 FOXD4L3Q6VB84 417 aaPredicted RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 KIAA0907Q7Z7F0 614 aaPredicted RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 PDZD3Q86UT5 571 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 GUF1Q8N442 669 aaKnown RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 MDM1Q8TC05 714 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 FOXD4L4Q8WXT5 416 aaPredicted RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 TMEM176AQ96HP8 235 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 HEXIM2Q96MH2 286 aaKnown RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 IRX2Q9BZI1 471 aaPredicted RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 LHX5Q9H2C1 402 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 C6orf106Q9H6K1 298 aaPredicted RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 CISHQ9NSE2 258 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 HBS1LQ9Y450 684 aaKnown RBP10.9□□□□□ -0.66
HDLBP-227ENST00000458564 SLCO1B1Q9Y6L6 691 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 PTPRBP23467 1997 aa10.9□□□□□ -0.66
HDLBP-227ENST00000458564 FAM237AA0A1B0GTK4 181 aa10.89□□□□□ -0.67
HDLBP-227ENST00000458564 XPO1O14980 1071 aaKnown RBP10.89□□□□□ -0.67
HDLBP-227ENST00000458564 PAPSS1O43252 624 aaPredicted RBP10.89□□□□□ -0.67
HDLBP-227ENST00000458564 SEMA4FO95754 770 aa10.89□□□□□ -0.67
HDLBP-227ENST00000458564 ATXN1LP0C7T5 689 aaKnown RBP10.89□□□□□ -0.67
HDLBP-227ENST00000458564 HLA-EP13747 358 aa10.89□□□□□ -0.67
HDLBP-227ENST00000458564 ACSL1P33121 698 aa10.89□□□□□ -0.67
HDLBP-227ENST00000458564 GRK6P43250 576 aa10.89□□□□□ -0.67
HDLBP-227ENST00000458564 HARS2P49590 506 aaKnown RBP10.89□□□□□ -0.67
HDLBP-227ENST00000458564 CSNK1EP49674 416 aaKnown RBP10.89□□□□□ -0.67
HDLBP-227ENST00000458564 MXI1P50539 228 aa10.89□□□□□ -0.67
HDLBP-227ENST00000458564 TKTL1P51854 596 aa10.89□□□□□ -0.67
HDLBP-227ENST00000458564 BCAT1P54687 386 aa10.89□□□□□ -0.67
HDLBP-227ENST00000458564 DNM1Q05193 864 aaKnown RBP10.89□□□□□ -0.67
HDLBP-227ENST00000458564 NUMA1Q14980 2115 aa10.89□□□□□ -0.67
HDLBP-227ENST00000458564 SUZ12Q15022 739 aaKnown RBP10.89□□□□□ -0.67
HDLBP-227ENST00000458564 TEAD4Q15561 434 aa10.89□□□□□ -0.67
HDLBP-227ENST00000458564 PTPRNQ16849 979 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms