RNA–Protein interactions for RNA: ENST00000456662.5

DDX39B-212, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-212ENST00000456662 GDF3Q9NR23 364 aa12.53□□□□□ -0.4
DDX39B-212ENST00000456662 BLOC1S4Q9NUP1 217 aa12.53□□□□□ -0.4
DDX39B-212ENST00000456662 INTS13Q9NVM9 706 aa12.53□□□□□ -0.4
DDX39B-212ENST00000456662 RBAKQ9NYW8 714 aaPredicted RBP12.53□□□□□ -0.4
DDX39B-212ENST00000456662 MAN2B2Q9Y2E5 1009 aa12.53□□□□□ -0.4
DDX39B-212ENST00000456662 SPTBN1Q01082 2364 aaKnown RBP12.52□□□□□ -0.4
DDX39B-212ENST00000456662 PMS2P1A4D2B8 440 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 FAM47DPA6NHR8 397 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 TLR4O00206 839 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 CSO75390 466 aaKnown RBP12.52□□□□□ -0.41
DDX39B-212ENST00000456662 BEST1O76090 585 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 CST3P01034 146 aaPredicted RBP12.52□□□□□ -0.41
DDX39B-212ENST00000456662 ATP5C1P36542 298 aaKnown RBP12.52□□□□□ -0.41
DDX39B-212ENST00000456662 CCR10P46092 362 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 ARRB1P49407 418 aaPredicted RBP12.52□□□□□ -0.41
DDX39B-212ENST00000456662 CLN3Q13286 438 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 NCEH1Q6PIU2 408 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 SLC25A45Q8N413 288 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 KCTD17Q8N5Z5 321 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 KRI1Q8N9T8 703 aaKnown RBP12.52□□□□□ -0.41
DDX39B-212ENST00000456662 ZMIZ2Q8NF64 920 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 EXTL1Q92935 676 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 PRR11Q96HE9 360 aaPredicted RBP12.52□□□□□ -0.41
DDX39B-212ENST00000456662 SLC46A1Q96NT5 459 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 SNX25Q9H3E2 840 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 MTG2Q9H4K7 406 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 CAAP1Q9H8G2 361 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 AASDHPPTQ9NRN7 309 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 THSD1Q9NS62 852 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 SERGEFQ9UGK8 458 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 LSM7Q9UK45 103 aaKnown RBP12.52□□□□□ -0.41
DDX39B-212ENST00000456662 PAXBP1Q9Y5B6 917 aa12.52□□□□□ -0.41
DDX39B-212ENST00000456662 YKT6O15498 198 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 TACC1O75410 805 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 PPP1R37O75864 691 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 STC2O76061 302 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 NEFLP07196 543 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 FAM87AP0C7U9 286 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 MCM6Q14566 821 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 ANKS1BQ7Z6G8 1248 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 ZC3H3Q8IXZ2 948 aaKnown RBP12.51□□□□□ -0.41
DDX39B-212ENST00000456662 B3GALNT2Q8NCR0 500 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 FBXO18Q8NFZ0 1043 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 CYB5D2Q8WUJ1 264 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 C8orf76Q96K31 380 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 GZF1Q9H116 711 aaPredicted RBP12.51□□□□□ -0.41
DDX39B-212ENST00000456662 OSBPL2Q9H1P3 480 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 ERVMER34-1Q9H9K5 563 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 NMUR1Q9HB89 426 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 CYLDQ9NQC7 956 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.51□□□□□ -0.41
DDX39B-212ENST00000456662 NOL7Q9UMY1 257 aaKnown RBP12.51□□□□□ -0.41
DDX39B-212ENST00000456662 SRPK3Q9UPE1 567 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 ICE1Q9Y2F5 2266 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 LRBAP50851 2863 aa12.51□□□□□ -0.41
DDX39B-212ENST00000456662 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
DDX39B-212ENST00000456662 TIMM44O43615 452 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 SDC3O75056 442 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 DNTTP04053 509 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 TMEM191BP0C7N4 346 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 PLA2G4AP47712 749 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 ZBTB16Q05516 673 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 ZNF211Q13398 564 aaPredicted RBP12.5□□□□□ -0.41
DDX39B-212ENST00000456662 EIF4HQ15056 248 aaKnown RBP12.5□□□□□ -0.41
DDX39B-212ENST00000456662 IGFBP7Q16270 282 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 IGF2-ASQ6U949 168 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 SKA1Q96BD8 255 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 DEPDC7Q96QD5 511 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 SMOQ99835 787 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 CBWD1Q9BRT8 395 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 NEUROG2Q9H2A3 272 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 PCIF1Q9H4Z3 704 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 COMMD8Q9NX08 183 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 SATB2Q9UPW6 733 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 FBN2P35556 2912 aa12.5□□□□□ -0.41
DDX39B-212ENST00000456662 A0A1B0GVM2 712 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 ENO4A6NNW6 628 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 A8MXQ7 604 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 SRSF6Q13247 344 aaKnown RBP12.49□□□□□ -0.41
DDX39B-212ENST00000456662 ZSCAN23Q3MJ62 389 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 FNDC3BQ53EP0 1204 aaKnown RBP12.49□□□□□ -0.41
DDX39B-212ENST00000456662 XKR5Q6UX68 686 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 DYMQ7RTS9 669 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 FAM35AQ86V20 835 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 FUKQ8N0W3 1084 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 CDK5RAP3Q96JB5 506 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 CCNL2Q96S94 520 aaPredicted RBP12.49□□□□□ -0.41
DDX39B-212ENST00000456662 SEMA3CQ99985 751 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 TLR8Q9NR97 1041 aaKnown RBP12.49□□□□□ -0.41
DDX39B-212ENST00000456662 FBXL12Q9NXK8 326 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 SEPT3Q9UH03 358 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 CACNA1DQ01668 2161 aa12.49□□□□□ -0.41
DDX39B-212ENST00000456662 BLACEA4D250 179 aa12.48□□□□□ -0.41
DDX39B-212ENST00000456662 VWA3AA6NCI4 1184 aa12.48□□□□□ -0.41
DDX39B-212ENST00000456662 CDRT15L2A8MXV6 281 aa12.48□□□□□ -0.41
DDX39B-212ENST00000456662 KRT18P05783 430 aaKnown RBP12.48□□□□□ -0.41
DDX39B-212ENST00000456662 FAM163BP0C2L3 166 aa12.48□□□□□ -0.41
DDX39B-212ENST00000456662 GIMD1P0DJR0 217 aa12.48□□□□□ -0.41
DDX39B-212ENST00000456662 RBMS1P29558 406 aaKnown RBP12.48□□□□□ -0.41
DDX39B-212ENST00000456662 ABCD1P33897 745 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms