RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TM9SF3Q9HD45 589 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ABCB8Q9NUT2 735 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 MARCH2Q9P0N8 246 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 WDR35Q9P2L0 1181 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 THAP10Q9P2Z0 257 aaPredicted RBP6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PCDHA7Q9UN72 937 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 APOBEC2Q9Y235 224 aaKnown RBP6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PCDHA5Q9Y5H7 936 aa6.28□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PYCARD-AS1I3L0S3 204 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 K7ELQ4 463 aaPredicted RBP6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PLK4O00444 970 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 WNT9AO14904 365 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DKK1O94907 266 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 YEATS4O95619 227 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SEMA4FO95754 770 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ACADMP11310 421 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 P4HA1P13674 534 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PFKFB1P16118 471 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 NR2F2P24468 414 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ITPKBP27987 946 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CD70P32970 193 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 VAMP7P51809 220 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 METAP1P53582 386 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 YWHAGP61981 247 aaKnown RBP eCLIP6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 AMPD3Q01432 767 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ARID5AQ03989 594 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DNM1Q05193 864 aaKnown RBP6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PTPRNQ16849 979 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PREPLQ4J6C6 727 aaPredicted RBP6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RESP18Q5W5W9 173 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CNNM4Q6P4Q7 775 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MMS22LQ6ZRQ5 1243 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 NUDT18Q6ZVK8 323 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PIGZQ86VD9 579 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 FMNL3Q8IVF7 1028 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CRYBG2Q8N1P7 616 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 KCNV2Q8TDN2 545 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RHBDD1Q8TEB9 315 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DNASE2BQ8WZ79 361 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 BIRC7Q96CA5 298 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PRICKLE1Q96MT3 831 aaPredicted RBP6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 HNRNPABQ99729 332 aaKnown RBP6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DUSP9Q99956 384 aaKnown RBP6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 NT5C1AQ9BXI3 368 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 BACH2Q9BYV9 841 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 IMPG2Q9BZV3 1241 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DMAC2Q9NW81 257 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ELOVL2Q9NXB9 296 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SFMBT1Q9UHJ3 866 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MORC2Q9Y6X9 1032 aaPredicted RBP6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 BSNQ9UPA5 3926 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DOCK9Q9BZ29 2069 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MYLKQ15746 1914 aa6.27□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MYO18BQ8IUG5 2567 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PIEZO2Q9H5I5 2752 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SPTA1P02549 2419 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 GOLGA6L7A0A1B0GV03 622 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 A0A1B0GVL5 298 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TRABD2BA6NFA1 517 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 YJEFN3A6XGL0 299 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 METTL12A8MUP2 240 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 E7ENQ6 273 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 GFRA2O00451 464 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 FLRT2O43155 660 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SDC3O75056 442 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PPP6R2O75170 966 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 GABBR2O75899 941 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 C1QL1O75973 258 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 F13A1P00488 732 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 WNT1P04628 370 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 IGHV4-34P06331 123 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RALAP11233 206 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 KRT10P13645 584 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PDIA4P13667 645 aaKnown RBP6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SLC6A4P31645 630 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RDXP35241 583 aaKnown RBP6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CTSOP43234 321 aaPredicted RBP6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PLA2G4AP47712 749 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PSMD8P48556 350 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RGS7P49802 495 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 MXI1P50539 228 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CCT8P50990 548 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 AFF3P51826 1226 aaKnown RBP6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 TKTL1P51854 596 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RAD23BP54727 409 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 RPS14P62263 151 aaKnown RBP6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PPP2CBP62714 309 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 PPP2CAP67775 309 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SEMG2Q02383 582 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 LRMPQ12912 555 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SLC14A1Q13336 389 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CAMK2BQ13554 666 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ENPP2Q13822 863 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 SGSM1Q2NKQ1 1148 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 POM121L1PQ3SYA9 428 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 DCAF17Q5H9S7 520 aaPredicted RBP6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 ERICH6BQ5W0A0 696 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 KLHDC10Q6PID8 442 aa6.26□□□□□ -1.41
HLA-DPA3-207ENST00000454398 CHST9Q7L1S5 443 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms