RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CNTN6Q9UQ52 1028 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 CHD8Q9HCK8 2581 aa13.44□□□□□ -0.26
CHD3-206ENST00000452447 KNL1Q8NG31 2342 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 TNRC6BQ9UPQ9 1833 aaKnown RBP13.43□□□□□ -0.26
CHD3-206ENST00000452447 PCNX2A6NKB5 2137 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 PATE3B3GLJ2 98 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 SART1O43290 800 aaKnown RBP13.43□□□□□ -0.26
CHD3-206ENST00000452447 TIMM44O43615 452 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 SYNCRIPO60506 623 aaKnown RBP13.43□□□□□ -0.26
CHD3-206ENST00000452447 GABBR2O75899 941 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 NCAM1P13591 858 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 USP8P40818 1118 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 ACADSBP45954 432 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 SLC11A2P49281 568 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 TRIM61Q5EBN2 209 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 NUGGCQ68CJ6 796 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 MSANTD2Q6P1R3 559 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 TRIM65Q6PJ69 517 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 KIAA1324Q6UXG2 1013 aaKnown RBP13.43□□□□□ -0.26
CHD3-206ENST00000452447 GBP6Q6ZN66 633 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 SCUBE3Q8IX30 993 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 MLKLQ8NB16 471 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 CLEC4CQ8WTT0 213 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 FAM149B1Q96BN6 582 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 MRGPRX1Q96LB2 322 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 NUSAP1Q9BXS6 441 aaKnown RBP13.43□□□□□ -0.26
CHD3-206ENST00000452447 CD248Q9HCU0 757 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 THAP10Q9P2Z0 257 aaPredicted RBP13.43□□□□□ -0.26
CHD3-206ENST00000452447 CYP8B1Q9UNU6 501 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 CACNA1EQ15878 2313 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 CKAP5Q14008 2032 aa13.43□□□□□ -0.26
CHD3-206ENST00000452447 C4orf47A7E2U8 309 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 TM4SF5O14894 197 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 THAP12O43422 761 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 ADRB1P08588 477 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 ITPKAP23677 461 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 HOXD9P28356 352 aaPredicted RBP13.42□□□□□ -0.26
CHD3-206ENST00000452447 GNA15P30679 374 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 IL12RB1P42701 662 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 GPD2P43304 727 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 MTIF2P46199 727 aaKnown RBP13.42□□□□□ -0.26
CHD3-206ENST00000452447 TBX4P57082 545 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 IRX4P78413 519 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 LMAN2Q12907 356 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 DAB2IPQ5VWQ8 1189 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 DEFB119Q8N690 84 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 ZNF606Q8WXB4 792 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 LSM14BQ9BX40 385 aaKnown RBP13.42□□□□□ -0.26
CHD3-206ENST00000452447 PRDM16Q9HAZ2 1276 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 TMEM9BQ9NQ34 198 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 EVLQ9UI08 416 aaPredicted RBP13.42□□□□□ -0.26
CHD3-206ENST00000452447 EPG5Q9HCE0 2579 aa13.42□□□□□ -0.26
CHD3-206ENST00000452447 IGHV1OR15-9A0A0B4J2B8 117 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 CAPN9O14815 690 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 NDUFS2O75306 463 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 SLC9A1P19634 815 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 RING1Q06587 406 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 ZNF33AQ06730 810 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 ZNF234Q14588 700 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 MEA1Q16626 185 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 ARHGAP44Q17R89 818 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 EXOC3L4Q17RC7 722 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 FUT11Q495W5 492 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 DENND1BQ6P3S1 775 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 SERPINA13PQ6UXR4 307 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 STK32AQ8WU08 396 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 SERPINB11Q96P15 392 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 DDX50Q9BQ39 737 aaKnown RBP13.41□□□□□ -0.26
CHD3-206ENST00000452447 TRIM62Q9BVG3 475 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 SLC6A17Q9H1V8 727 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 TMEM74BQ9NUR3 256 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 APEX2Q9UBZ4 518 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 PLA2G4CQ9UP65 541 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 CACNA1BQ00975 2339 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 ADAMTS9Q9P2N4 1935 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 ATXN2Q99700 1313 aaKnown RBP13.41□□□□□ -0.26
CHD3-206ENST00000452447 TYW5A2RUC4 315 aaKnown RBP13.41□□□□□ -0.26
CHD3-206ENST00000452447 GTPBP10A4D1E9 387 aaKnown RBP13.41□□□□□ -0.26
CHD3-206ENST00000452447 IRAK2O43187 625 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 ACSL4O60488 711 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 IGLV3-27P01718 113 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 CFIP05156 583 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 EPHX1P07099 455 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 HLA-FP30511 346 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 HOXD12P35452 270 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 RPL34P49207 117 aaKnown RBP13.41□□□□□ -0.26
CHD3-206ENST00000452447 ENPP2Q13822 863 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 MPP7Q5T2T1 576 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 GJB7Q6PEY0 223 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 SLC23A3Q6PIS1 610 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 FAM114A1Q8IWE2 563 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 ZNF557Q8N988 423 aaPredicted RBP13.41□□□□□ -0.26
CHD3-206ENST00000452447 CEP76Q8TAP6 659 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 WFIKKN2Q8TEU8 576 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 SORCS1Q8WY21 1168 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 MED15Q96RN5 788 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 SLC4A5Q9BY07 1137 aa13.41□□□□□ -0.26
CHD3-206ENST00000452447 IRX2Q9BZI1 471 aaPredicted RBP13.41□□□□□ -0.26
CHD3-206ENST00000452447 MKRN2Q9H000 416 aaKnown RBP13.41□□□□□ -0.26
CHD3-206ENST00000452447 CLSTN2Q9H4D0 955 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms