RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 TRIM5Q9C035 493 aa16.33■□□□□ 0.2
TOP3B-211ENST00000449704 METTL5Q9NRN9 209 aaKnown RBP16.33■□□□□ 0.2
TOP3B-211ENST00000449704 RRN3Q9NYV6 651 aa16.33■□□□□ 0.2
TOP3B-211ENST00000449704 TAS2R14Q9NYV8 317 aa16.33■□□□□ 0.2
TOP3B-211ENST00000449704 SLC12A6Q9UHW9 1150 aa16.33■□□□□ 0.2
TOP3B-211ENST00000449704 STAP1Q9ULZ2 295 aa16.33■□□□□ 0.2
TOP3B-211ENST00000449704 KIF26AQ9ULI4 1882 aaPredicted RBP16.33■□□□□ 0.2
TOP3B-211ENST00000449704 MUC6Q6W4X9 2439 aa16.33■□□□□ 0.2
TOP3B-211ENST00000449704 CACNG3O60359 315 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 GJB6O95452 261 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 PENKP01210 267 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-211ENST00000449704 FLT3P36888 993 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 PRKCIP41743 596 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 SULT1E1P49888 294 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
TOP3B-211ENST00000449704 TCF15Q12870 199 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 PTP4A2Q12974 167 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 PREPLQ4J6C6 727 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-211ENST00000449704 MPPE1Q53F39 396 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 FYB2Q5VWT5 728 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 GRAMD4Q6IC98 578 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 GAS2L3Q86XJ1 694 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 VSTM4Q8IW00 320 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 SFTPA1Q8IWL2 248 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 SPEM1Q8N4L4 309 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 EMC1Q8N766 993 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 SYN2Q92777 582 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-211ENST00000449704 AZIN2Q96A70 460 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 P2RY11Q96G91 374 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 NPY6RQ99463 290 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 DDX50Q9BQ39 737 aaKnown RBP16.32■□□□□ 0.2
TOP3B-211ENST00000449704 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.32■□□□□ 0.2
TOP3B-211ENST00000449704 XPO7Q9UIA9 1087 aaKnown RBP16.32■□□□□ 0.2
TOP3B-211ENST00000449704 STOML2Q9UJZ1 356 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 TMEM59LQ9UK28 342 aa16.32■□□□□ 0.2
TOP3B-211ENST00000449704 K7EQS6 105 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 DDX3XO00571 662 aaKnown RBP eCLIP16.31■□□□□ 0.23e-9■■■□□ 17
TOP3B-211ENST00000449704 TPM1P09493 284 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 SLC2A3P11169 496 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 KRT3P12035 628 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 PDGFRAP16234 1089 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 TFE3P19532 575 aaPredicted RBP16.31■□□□□ 0.2
TOP3B-211ENST00000449704 ABCB4P21439 1286 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 CCR1P32246 355 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 CXCL12P48061 93 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 DGKGP49619 791 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 PTPN5P54829 565 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 CSTF1Q05048 431 aaKnown RBP16.31■□□□□ 0.2
TOP3B-211ENST00000449704 DEUP1Q05D60 604 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 SLC25A52Q3SY17 297 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 C2orf27AQ580R0 203 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 FAM133BQ5BKY9 247 aaKnown RBP16.31■□□□□ 0.2
TOP3B-211ENST00000449704 NADSYN1Q6IA69 706 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 PKN3Q6P5Z2 889 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 NUDT18Q6ZVK8 323 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 SND1Q7KZF4 910 aaKnown RBP eCLIP16.31■□□□□ 0.2
TOP3B-211ENST00000449704 MON1BQ7L1V2 547 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 ALYREFQ86V81 257 aaKnown RBP16.31■□□□□ 0.2
TOP3B-211ENST00000449704 PHTF2Q8N3S3 785 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 ATP6V0D2Q8N8Y2 350 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 RPLP0P6Q8NHW5 317 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 CCDC26Q8TAB7 109 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 OLIG1Q8TAK6 271 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 BTN2A3PQ96KV6 586 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 TBCBQ99426 244 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 IER2Q9BTL4 223 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.31■□□□□ 0.2
TOP3B-211ENST00000449704 SELENOOQ9BVL4 669 aa16.31■□□□□ 0.2
TOP3B-211ENST00000449704 BZW2Q9Y6E2 419 aaKnown RBP16.31■□□□□ 0.2
TOP3B-211ENST00000449704 CACNA1HO95180 2353 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 ANTXRLA6NF34 631 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 AP5Z1O43299 807 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 TBL1XO60907 577 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 ATG13O75143 517 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 F9P00740 461 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 SERPING1P05155 500 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 SLC6A4P31645 630 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 CCR3P51677 355 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 ATP11AP98196 1134 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 SATB1Q01826 763 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 EIF4EBP2Q13542 120 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-211ENST00000449704 TRIM14Q14142 442 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 C10orf76Q5T2E6 689 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 PIK3R6Q5UE93 754 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 OTUD1Q5VV17 481 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-211ENST00000449704 RAP1GAP2Q684P5 730 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 TRNP1Q6NT89 227 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 PPP1R2P3Q6NXS1 205 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 DNAJC24Q6P3W2 148 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 SARM1Q6SZW1 724 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 VPS36Q86VN1 386 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 CHSY1Q86X52 802 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 DNAAF5Q86Y56 855 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 MCOLN2Q8IZK6 566 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 TERB1Q8NA31 727 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 JOSD2Q8TAC2 188 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 RXFP2Q8WXD0 754 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 ATOH1Q92858 354 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-211ENST00000449704 CFAP57Q96MR6 1250 aa16.3■□□□□ 0.2
TOP3B-211ENST00000449704 ADAM33Q9BZ11 813 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms